Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.68□□□□□ -1.34
SSR1P43307 AL020997.1-201ENST00000446554 349 ntBASIC6.68□□□□□ -1.34
SSR1P43307 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.68□□□□□ -1.34
SSR1P43307 RN7SL413P-201ENST00000482700 297 ntBASIC6.68□□□□□ -1.34
SSR1P43307 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.68□□□□□ -1.34
SSR1P43307 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSR1P43307 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.68□□□□□ -1.34
SSR1P43307 AC093664.1-201ENST00000511779 289 ntBASIC6.68□□□□□ -1.34
SSR1P43307 RNA5SP96-201ENST00000516041 107 ntBASIC6.68□□□□□ -1.34
SSR1P43307 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.68□□□□□ -1.34
SSR1P43307 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SSR1P43307 TPRX1P1-201ENST00000557620 319 ntBASIC6.68□□□□□ -1.34
SSR1P43307 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.68□□□□□ -1.34
SSR1P43307 AC024267.2-201ENST00000582737 417 ntBASIC6.68□□□□□ -1.34
SSR1P43307 AC004805.3-201ENST00000603178 310 ntBASIC6.68□□□□□ -1.34
SSR1P43307 AL008582.1-201ENST00000609612 442 ntBASIC6.68□□□□□ -1.34
SSR1P43307 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.68□□□□□ -1.34
SSR1P43307 AC135068.11-201ENST00000636378 921 ntBASIC6.68□□□□□ -1.34
SSR1P43307 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.68□□□□□ -1.34
SSR1P43307 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SSR1P43307 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSR1P43307 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSR1P43307 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSR1P43307 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.68□□□□□ -1.34
SSR1P43307 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSR1P43307 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSR1P43307 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SSR1P43307 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SSR1P43307 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.67□□□□□ -1.34
SSR1P43307 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 AC010894.1-201ENST00000313760 361 ntBASIC6.67□□□□□ -1.34
SSR1P43307 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.67□□□□□ -1.34
SSR1P43307 RN7SKP237-201ENST00000364663 301 ntBASIC6.67□□□□□ -1.34
SSR1P43307 RNU1-84P-201ENST00000365447 164 ntBASIC6.67□□□□□ -1.34
SSR1P43307 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.67□□□□□ -1.34
SSR1P43307 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 COL11A2P1-205ENST00000441798 676 ntBASIC6.67□□□□□ -1.34
SSR1P43307 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.67□□□□□ -1.34
SSR1P43307 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.67□□□□□ -1.34
SSR1P43307 NPM1P9-201ENST00000453156 844 ntBASIC6.67□□□□□ -1.34
SSR1P43307 RN7SL790P-201ENST00000474043 298 ntBASIC6.67□□□□□ -1.34
SSR1P43307 MTCO1P55-201ENST00000489829 745 ntBASIC6.67□□□□□ -1.34
SSR1P43307 RN7SKP64-201ENST00000517206 328 ntBASIC6.67□□□□□ -1.34
SSR1P43307 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.67□□□□□ -1.34
SSR1P43307 AC131935.1-201ENST00000524621 333 ntBASIC6.67□□□□□ -1.34
SSR1P43307 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.67□□□□□ -1.34
SSR1P43307 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.67□□□□□ -1.34
SSR1P43307 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.67□□□□□ -1.34
SSR1P43307 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.67□□□□□ -1.34
SSR1P43307 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.67□□□□□ -1.34
SSR1P43307 AC027796.1-201ENST00000575593 512 ntBASIC6.67□□□□□ -1.34
SSR1P43307 MIR4732-201ENST00000581873 76 ntBASIC6.67□□□□□ -1.34
SSR1P43307 MIR3159-201ENST00000584572 74 ntBASIC6.67□□□□□ -1.34
SSR1P43307 MIR6070-201ENST00000613967 103 ntBASIC6.67□□□□□ -1.34
SSR1P43307 MIR6503-201ENST00000622884 86 ntBASIC6.67□□□□□ -1.34
SSR1P43307 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.67□□□□□ -1.34
SSR1P43307 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.67□□□□□ -1.34
SSR1P43307 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.67□□□□□ -1.34
SSR1P43307 CDY3P-201ENST00000454543 1618 ntBASIC6.67□□□□□ -1.34
SSR1P43307 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 HSPD1P7-201ENST00000447985 1686 ntBASIC6.67□□□□□ -1.34
SSR1P43307 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 AL137141.1-201ENST00000624622 4836 ntBASIC6.67□□□□□ -1.34
SSR1P43307 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSR1P43307 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
SSR1P43307 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SSR1P43307 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SSR1P43307 MTND5P12-201ENST00000502851 1449 ntBASIC6.67□□□□□ -1.34
SSR1P43307 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.67□□□□□ -1.34
SSR1P43307 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.67□□□□□ -1.34
SSR1P43307 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SSR1P43307 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SSR1P43307 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.66□□□□□ -1.34
SSR1P43307 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 OR9K1P-202ENST00000641111 3217 ntBASIC6.66□□□□□ -1.34
SSR1P43307 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.66□□□□□ -1.34
SSR1P43307 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
SSR1P43307 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.66□□□□□ -1.34
SSR1P43307 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.66□□□□□ -1.34
SSR1P43307 CYP4F30P-202ENST00000420048 405 ntBASIC6.66□□□□□ -1.34
SSR1P43307 AC113412.1-201ENST00000425840 504 ntBASIC6.66□□□□□ -1.34
SSR1P43307 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.66□□□□□ -1.34
SSR1P43307 AL645939.3-201ENST00000435408 225 ntBASIC6.66□□□□□ -1.34
SSR1P43307 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.66□□□□□ -1.34
SSR1P43307 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms