Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM23P36406 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRIM23P36406 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM23P36406 GUCY1B2-204ENST00000531898 1979 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM23P36406 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM23P36406 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM23P36406 AL132656.3-201ENST00000606384 1595 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM23P36406 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM23P36406 RN7SKP144-201ENST00000411108 279 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM23P36406 PPIAP10-201ENST00000438675 458 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 RPL5P10-201ENST00000445207 894 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 AC009963.3-201ENST00000458090 486 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRIM23P36406 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM23P36406 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM23P36406 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM23P36406 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM23P36406 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM23P36406 AP001858.2-201ENST00000536213 601 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 AC090888.3-201ENST00000558917 509 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 MRPS21P8-201ENST00000569196 235 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 AC233702.7-202ENST00000582941 211 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM23P36406 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM23P36406 AL591167.1-201ENST00000607321 456 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
TRIM23P36406 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM23P36406 AL359976.1-201ENST00000418655 3528 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 AC027575.3-201ENST00000583058 2747 ntBASIC6.2□□□□□ -1.42
TRIM23P36406 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM23P36406 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM23P36406 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM23P36406 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM23P36406 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM23P36406 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
TRIM23P36406 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM23P36406 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM23P36406 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM23P36406 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM23P36406 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM23P36406 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
TRIM23P36406 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM23P36406 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM23P36406 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 AC110373.1-201ENST00000505994 3505 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 AL662795.2-201ENST00000624252 3706 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
TRIM23P36406 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM23P36406 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
TRIM23P36406 RNA5SP110-201ENST00000362638 115 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 RNA5SP333-201ENST00000363466 118 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 RNU1-49P-201ENST00000363468 159 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 RNA5SP433-201ENST00000364491 114 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 RNA5SP334-201ENST00000364825 118 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM23P36406 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM23P36406 CYP4F30P-202ENST00000420048 405 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM23P36406 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM23P36406 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 VPS25P1-201ENST00000455691 508 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM23P36406 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM23P36406 RBBP4P1-201ENST00000502424 1276 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM23P36406 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM23P36406 AC090958.1-201ENST00000511122 351 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM23P36406 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM23P36406 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM23P36406 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM23P36406 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM23P36406 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM23P36406 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 AC092332.1-201ENST00000563684 829 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 AC067852.5-201ENST00000589299 310 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 AC091167.5-201ENST00000605689 894 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM23P36406 AC024255.1-201ENST00000614376 102 ntBASIC6.19□□□□□ -1.42
TRIM23P36406 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM23P36406 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM23P36406 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM23P36406 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.19□□□□□ -1.42
TRIM23P36406 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM23P36406 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM23P36406 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM23P36406 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
TRIM23P36406 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms