Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL8A2P25067 AC092724.1-201ENST00000624623 3397 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 AC009135.2-201ENST00000624136 1768 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 RBMY1HP-201ENST00000382759 1389 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.19□□□□□ -1.58
COL8A2P25067 AL355377.1-201ENST00000621125 1653 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.19□□□□□ -1.58
COL8A2P25067 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
COL8A2P25067 EIF3EP2-201ENST00000423042 1814 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.19□□□□□ -1.58
COL8A2P25067 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL8A2P25067 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.19□□□□□ -1.58
COL8A2P25067 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.19□□□□□ -1.58
COL8A2P25067 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 AL389925.1-201ENST00000432257 728 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 SEPT14P12-201ENST00000442280 560 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.19□□□□□ -1.58
COL8A2P25067 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.19□□□□□ -1.58
COL8A2P25067 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.19□□□□□ -1.58
COL8A2P25067 CST12P-201ENST00000457644 362 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 AC073594.1-201ENST00000462065 364 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 AC025458.1-201ENST00000506046 166 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 AC090568.1-201ENST00000509499 856 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.19□□□□□ -1.58
COL8A2P25067 NANOGNBP2-201ENST00000544753 553 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.19□□□□□ -1.58
COL8A2P25067 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.19□□□□□ -1.58
COL8A2P25067 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.19□□□□□ -1.58
COL8A2P25067 AC027229.1-201ENST00000583887 253 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.19□□□□□ -1.58
COL8A2P25067 NPIPB1P-202ENST00000588786 828 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.19□□□□□ -1.58
COL8A2P25067 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.19□□□□□ -1.58
COL8A2P25067 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.19□□□□□ -1.58
COL8A2P25067 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
COL8A2P25067 AC108865.2-201ENST00000606881 432 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.19□□□□□ -1.58
COL8A2P25067 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.19□□□□□ -1.58
COL8A2P25067 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
COL8A2P25067 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
COL8A2P25067 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 AC024587.1-201ENST00000505925 2157 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 AC084782.1-201ENST00000564401 2465 ntBASIC5.19□□□□□ -1.58
COL8A2P25067 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.19□□□□□ -1.58
COL8A2P25067 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL8A2P25067 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
COL8A2P25067 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.19□□□□□ -1.58
COL8A2P25067 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
COL8A2P25067 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL8A2P25067 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 AC073365.1-203ENST00000641055 1992 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 MTCO1P28-201ENST00000574177 1528 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL8A2P25067 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.18□□□□□ -1.58
COL8A2P25067 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
COL8A2P25067 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
COL8A2P25067 AC008627.1-201ENST00000517511 1704 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.18□□□□□ -1.58
COL8A2P25067 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL8A2P25067 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.18□□□□□ -1.58
COL8A2P25067 RNA5SP375-201ENST00000362975 119 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 RNA5SP122-201ENST00000384457 108 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 LYPLA1P3-201ENST00000402650 695 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 IPPKP1-201ENST00000422501 768 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL8A2P25067 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.18□□□□□ -1.58
COL8A2P25067 AC009237.1-201ENST00000442127 744 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.18□□□□□ -1.58
COL8A2P25067 ZNF619P1-201ENST00000446539 752 ntBASIC5.18□□□□□ -1.58
COL8A2P25067 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.18□□□□□ -1.58
COL8A2P25067 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms