Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC115223.1-201ENST00000466377 870 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 ARL2BPP4-201ENST00000506854 471 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 RNA5SP96-201ENST00000516041 107 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.34□□□□□ -1.23
PDGFAP04085 NPM1P6-201ENST00000521088 871 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC7.34□□□□□ -1.23
PDGFAP04085 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.34□□□□□ -1.23
PDGFAP04085 PDCL3P1-201ENST00000534575 734 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PDGFAP04085 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC7.34□□□□□ -1.23
PDGFAP04085 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.34□□□□□ -1.23
PDGFAP04085 NIFKP8-201ENST00000560500 874 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 RN7SL689P-201ENST00000577215 297 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC7.34□□□□□ -1.23
PDGFAP04085 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 OR4G1P-201ENST00000588632 938 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.34□□□□□ -1.23
PDGFAP04085 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.34□□□□□ -1.23
PDGFAP04085 LARP7P1-201ENST00000605576 316 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 AL359314.1-201ENST00000616913 261 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 AC010332.1-201ENST00000620439 97 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 OR11H2-202ENST00000641517 1085 ntBASIC7.34□□□□□ -1.23
PDGFAP04085 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.34□□□□□ -1.23
PDGFAP04085 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDGFAP04085 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
PDGFAP04085 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC7.34□□□□□ -1.23
PDGFAP04085 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
PDGFAP04085 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
PDGFAP04085 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
PDGFAP04085 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
PDGFAP04085 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
PDGFAP04085 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC7.33□□□□□ -1.24
PDGFAP04085 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 COL6A4P1-202ENST00000487147 4317 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 AC107398.3-201ENST00000562284 7000 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 TRIM51EP-201ENST00000524374 1516 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 AL445250.1-203ENST00000641829 1535 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PDGFAP04085 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.33□□□□□ -1.24
PDGFAP04085 AC245505.2-201ENST00000553572 3055 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PDGFAP04085 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.33□□□□□ -1.24
PDGFAP04085 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 RN7SKP133-201ENST00000364845 340 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 Y_RNA.311-201ENST00000365068 96 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PDGFAP04085 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.33□□□□□ -1.24
PDGFAP04085 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.33□□□□□ -1.24
PDGFAP04085 AL109918.1-202ENST00000406724 436 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.33□□□□□ -1.24
PDGFAP04085 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 RPL12P27-201ENST00000414870 496 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 TCEA1P4-201ENST00000415066 844 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 AC004448.2-201ENST00000422360 586 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC7.33□□□□□ -1.24
PDGFAP04085 AC104651.1-201ENST00000427559 735 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC7.33□□□□□ -1.24
PDGFAP04085 OR13K1P-201ENST00000444577 975 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 FTH1P7-201ENST00000450676 552 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC7.33□□□□□ -1.24
PDGFAP04085 TCEAL4P1-201ENST00000453620 588 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 SSXP1-201ENST00000453640 473 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 AF305872.1-201ENST00000485217 471 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 PDCL3P4-201ENST00000489621 720 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PDGFAP04085 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 RN7SL182P-201ENST00000496499 300 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 AC006499.5-201ENST00000505037 514 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 AC008629.3-201ENST00000505786 586 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.33□□□□□ -1.24
PDGFAP04085 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms