Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL645939.3-201ENST00000435408 225 ntBASIC6.14□□□□□ -1.43
LDLRP01130 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LDLRP01130 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.14□□□□□ -1.43
LDLRP01130 AC114728.1-201ENST00000488289 483 ntBASIC6.14□□□□□ -1.43
LDLRP01130 AC002456.2-201ENST00000509356 380 ntBASIC6.14□□□□□ -1.43
LDLRP01130 RNA5SP278-201ENST00000517055 102 ntBASIC6.14□□□□□ -1.43
LDLRP01130 AC021733.2-201ENST00000518830 497 ntBASIC6.14□□□□□ -1.43
LDLRP01130 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LDLRP01130 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.14□□□□□ -1.43
LDLRP01130 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.14□□□□□ -1.43
LDLRP01130 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.14□□□□□ -1.43
LDLRP01130 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.14□□□□□ -1.43
LDLRP01130 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.14□□□□□ -1.43
LDLRP01130 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.14□□□□□ -1.43
LDLRP01130 AC233702.7-202ENST00000582941 211 ntBASIC6.14□□□□□ -1.43
LDLRP01130 MIR4420-201ENST00000583944 77 ntBASIC6.14□□□□□ -1.43
LDLRP01130 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.14□□□□□ -1.43
LDLRP01130 AL353729.2-201ENST00000605859 1249 ntBASIC6.14□□□□□ -1.43
LDLRP01130 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.14□□□□□ -1.43
LDLRP01130 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LDLRP01130 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.14□□□□□ -1.43
LDLRP01130 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LDLRP01130 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
LDLRP01130 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LDLRP01130 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LDLRP01130 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.14□□□□□ -1.43
LDLRP01130 AC130360.2-201ENST00000533477 1556 ntBASIC6.14□□□□□ -1.43
LDLRP01130 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.14□□□□□ -1.43
LDLRP01130 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LDLRP01130 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
LDLRP01130 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 DNM1P47-203ENST00000571780 12667 ntBASIC6.13□□□□□ -1.43
LDLRP01130 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
LDLRP01130 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 AP002512.4-202ENST00000641599 4530 ntBASIC6.13□□□□□ -1.43
LDLRP01130 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
LDLRP01130 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
LDLRP01130 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 AC240504.1-201ENST00000395709 845 ntBASIC6.13□□□□□ -1.43
LDLRP01130 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.13□□□□□ -1.43
LDLRP01130 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.13□□□□□ -1.43
LDLRP01130 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.13□□□□□ -1.43
LDLRP01130 BX679664.2-201ENST00000439282 283 ntBASIC6.13□□□□□ -1.43
LDLRP01130 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.13□□□□□ -1.43
LDLRP01130 GAPDHP20-201ENST00000444107 1007 ntBASIC6.13□□□□□ -1.43
LDLRP01130 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 SNX18P26-201ENST00000458433 740 ntBASIC6.13□□□□□ -1.43
LDLRP01130 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.13□□□□□ -1.43
LDLRP01130 RN7SL216P-201ENST00000471607 298 ntBASIC6.13□□□□□ -1.43
LDLRP01130 RN7SL413P-201ENST00000482700 297 ntBASIC6.13□□□□□ -1.43
LDLRP01130 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.13□□□□□ -1.43
LDLRP01130 SNX18P23-201ENST00000510867 677 ntBASIC6.13□□□□□ -1.43
LDLRP01130 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.13□□□□□ -1.43
LDLRP01130 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.13□□□□□ -1.43
LDLRP01130 SCARNA21.2-201ENST00000516600 166 ntBASIC6.13□□□□□ -1.43
LDLRP01130 RNU6-551P-201ENST00000516661 103 ntBASIC6.13□□□□□ -1.43
LDLRP01130 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.13□□□□□ -1.43
LDLRP01130 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.13□□□□□ -1.43
LDLRP01130 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.13□□□□□ -1.43
LDLRP01130 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.13□□□□□ -1.43
LDLRP01130 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.13□□□□□ -1.43
LDLRP01130 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.13□□□□□ -1.43
LDLRP01130 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.13□□□□□ -1.43
LDLRP01130 AL132640.3-201ENST00000630473 177 ntBASIC6.13□□□□□ -1.43
LDLRP01130 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.13□□□□□ -1.43
LDLRP01130 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 SHQ1P1-201ENST00000437111 1544 ntBASIC6.13□□□□□ -1.43
LDLRP01130 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.13□□□□□ -1.43
LDLRP01130 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 AC010401.2-201ENST00000575137 4934 ntBASIC6.13□□□□□ -1.43
LDLRP01130 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.13□□□□□ -1.43
LDLRP01130 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
LDLRP01130 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LDLRP01130 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.13□□□□□ -1.43
LDLRP01130 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LDLRP01130 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LDLRP01130 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LDLRP01130 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
LDLRP01130 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LDLRP01130 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
LDLRP01130 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LDLRP01130 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LDLRP01130 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LDLRP01130 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LDLRP01130 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LDLRP01130 OR7A2P-201ENST00000304105 930 ntBASIC6.12□□□□□ -1.43
LDLRP01130 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms