Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.7□□□□□ -1.5
ZIC3O60481 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.7□□□□□ -1.5
ZIC3O60481 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.7□□□□□ -1.5
ZIC3O60481 AC009120.3-201ENST00000563335 499 ntBASIC5.7□□□□□ -1.5
ZIC3O60481 AC233702.7-202ENST00000582941 211 ntBASIC5.7□□□□□ -1.5
ZIC3O60481 VN1R81P-201ENST00000602085 372 ntBASIC5.7□□□□□ -1.5
ZIC3O60481 AC026790.2-201ENST00000606282 430 ntBASIC5.7□□□□□ -1.5
ZIC3O60481 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.7□□□□□ -1.5
ZIC3O60481 AC026367.3-201ENST00000619032 590 ntBASIC5.7□□□□□ -1.5
ZIC3O60481 MIR7159-201ENST00000620587 66 ntBASIC5.7□□□□□ -1.5
ZIC3O60481 FO681491.1-202ENST00000623392 737 ntBASIC5.7□□□□□ -1.5
ZIC3O60481 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
ZIC3O60481 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZIC3O60481 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC5.7□□□□□ -1.5
ZIC3O60481 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZIC3O60481 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZIC3O60481 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZIC3O60481 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.7□□□□□ -1.5
ZIC3O60481 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ZIC3O60481 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.7□□□□□ -1.5
ZIC3O60481 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.7□□□□□ -1.5
ZIC3O60481 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.7□□□□□ -1.5
ZIC3O60481 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZIC3O60481 AL133243.2-201ENST00000610331 1621 ntBASIC5.7□□□□□ -1.5
ZIC3O60481 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.7□□□□□ -1.5
ZIC3O60481 AP004289.1-201ENST00000436307 2205 ntBASIC5.7□□□□□ -1.5
ZIC3O60481 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZIC3O60481 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZIC3O60481 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.69□□□□□ -1.5
ZIC3O60481 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.69□□□□□ -1.5
ZIC3O60481 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ZIC3O60481 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 RNU1-65P-201ENST00000363919 148 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 RN7SKP187-201ENST00000365536 330 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AL589994.1-201ENST00000404962 340 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.69□□□□□ -1.5
ZIC3O60481 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 RPL36P18-201ENST00000419316 318 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 CYP4F30P-202ENST00000420048 405 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 NPM1P25-201ENST00000429734 854 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AL451136.1-201ENST00000435399 325 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AC010240.2-201ENST00000445363 1205 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 AL590004.3-202ENST00000445883 451 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AC092967.1-201ENST00000449016 481 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 VPS25P1-201ENST00000455691 508 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.69□□□□□ -1.5
ZIC3O60481 RPL12P30-201ENST00000488389 499 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AC023818.1-201ENST00000498379 384 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 HSD3BP3-201ENST00000514706 994 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.69□□□□□ -1.5
ZIC3O60481 IGHV1-14-201ENST00000523391 241 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 OR4A46P-201ENST00000527255 933 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.69□□□□□ -1.5
ZIC3O60481 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.69□□□□□ -1.5
ZIC3O60481 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.69□□□□□ -1.5
ZIC3O60481 DPPA3P2-201ENST00000553589 478 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 MTND2P13-201ENST00000577438 1039 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.69□□□□□ -1.5
ZIC3O60481 AC067852.5-201ENST00000589299 310 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AL513218.1-201ENST00000606527 391 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AC024933.1-201ENST00000608472 348 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.69□□□□□ -1.5
ZIC3O60481 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
ZIC3O60481 AC110373.1-201ENST00000505994 3505 ntBASIC5.69□□□□□ -1.5
ZIC3O60481 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
ZIC3O60481 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ZIC3O60481 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms