Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 AC010624.4-201ENST00000597606 1351 ntBASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 EDA-213ENST00000616899 4643 ntTSL 5 BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 RNA5SP335-201ENST00000363817 110 ntBASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 SNX10-203ENST00000409367 746 ntTSL 5 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 RN7SL51P-201ENST00000468230 285 ntBASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 AC093824.1-201ENST00000508796 343 ntBASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 AC106730.2-201ENST00000566641 540 ntBASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 MIR5096-201ENST00000583713 70 ntBASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 ALB-219ENST00000621085 1418 ntTSL 5 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 TNC-210ENST00000535648 7508 ntTSL 5 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 AC068138.1-201ENST00000412635 217 ntBASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 AL133482.1-201ENST00000415988 498 ntBASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RIMBP3Q9UFD9 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 NLRP3P1-201ENST00000622303 1785 ntBASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 GAPDHP42-201ENST00000406848 981 ntBASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 GTF2IP2-201ENST00000424290 697 ntBASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 AC245047.5-201ENST00000437312 556 ntBASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 VDAC2P4-201ENST00000452925 711 ntBASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 OR5AN2P-201ENST00000534535 896 ntBASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 AC132068.1-201ENST00000623805 459 ntBASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
RIMBP3Q9UFD9 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 GTF2IP4-201ENST00000453092 2054 ntBASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 RNA5SP91-201ENST00000390902 119 ntBASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 NDUFA12P1-201ENST00000455914 406 ntBASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 RN7SKP21-201ENST00000516503 220 ntBASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 GTF2IP11-201ENST00000526931 420 ntBASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 AC005084.1-201ENST00000605160 304 ntBASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 AL118522.2-201ENST00000616045 615 ntBASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 FP325330.3-201ENST00000623760 9537 ntBASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms