Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AC245096.1-201ENST00000413104 546 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AL096829.1-201ENST00000413677 457 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 GAPDHP19-201ENST00000431768 1005 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 KATNBL1P2-201ENST00000433311 835 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 LINC00328-2P-201ENST00000436585 219 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 RPL23AP60-201ENST00000450011 454 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AC002075.1-201ENST00000457396 676 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 RBMY2HP-201ENST00000457961 720 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AC098818.1-201ENST00000478593 252 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AC117500.1-201ENST00000497352 755 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AC106822.1-201ENST00000502647 526 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 GUSBP9-201ENST00000510138 584 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 RN7SKP183-201ENST00000517169 324 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 MIR4701-201ENST00000583094 63 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AL355974.3-201ENST00000617383 467 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AL359955.1-201ENST00000455242 3275 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 LINC01613-201ENST00000561476 2780 ntBASIC5.61□□□□□ -1.51
RSPO3Q9BXY4 AC024651.2-201ENST00000562480 2098 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 YWHAZP4-201ENST00000392459 708 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AL035422.1-201ENST00000414193 397 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 RPS15AP30-201ENST00000420976 390 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AC002069.1-201ENST00000429649 1159 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 RPS3AP38-201ENST00000435889 763 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 POU5F1P5-201ENST00000445059 658 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AC138517.1-201ENST00000515724 568 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 SNORA74.1-201ENST00000516320 180 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 NATP-201ENST00000523491 878 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 OR7E158P-201ENST00000524483 910 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AC021269.1-201ENST00000526860 705 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 RPSAP75-201ENST00000605848 301 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AC005899.7-201ENST00000618199 588 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AC021422.1-201ENST00000621212 473 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 AC007603.3-201ENST00000636915 979 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 SMG1P5-202ENST00000529428 4219 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 SMG1P2-201ENST00000566127 4221 ntBASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO3Q9BXY4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms