Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
ARHGEF40Q8TER5 MAPK10-344ENST00000641718 3746 ntBASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 AFP-201ENST00000226359 1914 ntTSL 5 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 AC079753.1-201ENST00000623243 3868 ntBASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 AC062029.1-202ENST00000606164 3651 ntBASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 RN7SKP29-201ENST00000410957 272 ntBASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 RPS4XP1-201ENST00000482189 787 ntBASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 AC093890.1-201ENST00000502554 540 ntBASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 NPM1P27-201ENST00000502784 830 ntBASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 AC147055.3-201ENST00000510547 851 ntBASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
ARHGEF40Q8TER5 AL359976.1-201ENST00000418655 3528 ntBASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 OR10R3P-201ENST00000361688 942 ntBASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 RNA5SP333-201ENST00000363466 118 ntBASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 RNA5SP334-201ENST00000364825 118 ntBASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 RNU11-6P-201ENST00000391127 133 ntBASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 UBE2V1P14-201ENST00000415815 558 ntBASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 CYCSP12-201ENST00000437729 300 ntBASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 Z80107.2-201ENST00000445127 392 ntBASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 OR51A1P-201ENST00000511110 946 ntBASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 GSTP1P1-201ENST00000548078 319 ntBASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 AC104785.1-201ENST00000603220 588 ntBASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 BIN2P1-201ENST00000504996 1530 ntBASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.88□□□□□ -0.99
ARHGEF40Q8TER5 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 PARP4P2-201ENST00000446672 3326 ntBASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 MIR141-201ENST00000384975 95 ntBASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 EIF2S2P3-201ENST00000428356 999 ntBASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 AC079841.1-201ENST00000481228 950 ntBASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 AL671862.1-201ENST00000515851 349 ntBASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 NOP10-202ENST00000557912 436 ntTSL 2 BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 OR1F2P-201ENST00000570470 933 ntBASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 SRRM1P3-201ENST00000426911 2678 ntBASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 CLCA3P-203ENST00000490028 2781 ntBASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 TMEM75-201ENST00000624314 2165 ntBASIC8.87□□□□□ -0.99
ARHGEF40Q8TER5 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ARHGEF40Q8TER5 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ARHGEF40Q8TER5 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.86□□□□□ -0.99
ARHGEF40Q8TER5 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.86□□□□□ -0.99
ARHGEF40Q8TER5 BX322650.1-201ENST00000332359 2143 ntBASIC8.86□□□□□ -0.99
ARHGEF40Q8TER5 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
ARHGEF40Q8TER5 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
ARHGEF40Q8TER5 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
ARHGEF40Q8TER5 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms