Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC9.41□□□□□ -0.9
CFAP43Q8NDM7 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC9.41□□□□□ -0.9
CFAP43Q8NDM7 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CFAP43Q8NDM7 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CFAP43Q8NDM7 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CFAP43Q8NDM7 ING3-204ENST00000431467 1447 ntTSL 2 BASIC9.41□□□□□ -0.9
CFAP43Q8NDM7 AC016583.1-201ENST00000624221 2431 ntBASIC9.41□□□□□ -0.9
CFAP43Q8NDM7 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 PDZK1P1-202ENST00000425209 1350 ntBASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 AL359091.1-201ENST00000449048 1734 ntBASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 RNA5SP211-201ENST00000365516 117 ntBASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 AL096829.1-201ENST00000413677 457 ntBASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 AC009784.1-201ENST00000426484 460 ntBASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 AC005532.2-201ENST00000467154 373 ntBASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 AC093763.2-201ENST00000505334 1223 ntBASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 CDH12P4-201ENST00000517835 295 ntBASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 CDH12P3-201ENST00000517935 295 ntBASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 CDH12P1-201ENST00000518435 295 ntBASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 OR7E158P-201ENST00000524483 910 ntBASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 AC022919.1-201ENST00000624979 626 ntBASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CFAP43Q8NDM7 TMEM75-201ENST00000624314 2165 ntBASIC9.4□□□□□ -0.91
CFAP43Q8NDM7 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 RNA5SP394-201ENST00000364216 119 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 AL645927.1-201ENST00000396783 406 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 RN7SKP125-201ENST00000410481 302 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 SDC4P-201ENST00000453285 601 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 RN7SL72P-201ENST00000460697 269 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 RN7SL222P-201ENST00000476452 299 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 AC114728.1-201ENST00000488289 483 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 AL035690.1-201ENST00000490892 383 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 RN7SKP98-201ENST00000517070 156 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 Mico1.1-201ENST00000611698 204 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 PABPC1P8-201ENST00000452851 2086 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 RNA5SP183-201ENST00000362452 119 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 AL445928.1-201ENST00000435545 222 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 CNOT7P2-201ENST00000441051 832 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 AC115223.1-201ENST00000466377 870 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 AC008953.1-201ENST00000497334 318 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 AC110056.1-201ENST00000525759 911 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 AL137246.2-201ENST00000613439 662 ntBASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFAP43Q8NDM7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 AL353763.1-201ENST00000624467 1628 ntBASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 LINC02019-201ENST00000608605 2060 ntBASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 SALL4P7-201ENST00000555779 3120 ntBASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms