Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RPL31P44-201ENST00000447680 377 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RPL7P31-201ENST00000450192 724 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 TRBV21-1-201ENST00000453262 348 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 LINC02037-201ENST00000455821 1195 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC110994.1-201ENST00000468519 406 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC016546.1-201ENST00000473590 463 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AP000797.1-201ENST00000478870 387 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RPS10P16-201ENST00000483812 496 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RPL23AP66-201ENST00000494341 479 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RNA5SP135-201ENST00000517019 125 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 IGLV3-7-201ENST00000522952 271 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 POLR2KP1-201ENST00000553226 168 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 DPPA3P2-202ENST00000557188 1219 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 UBE2FP2-201ENST00000566646 462 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC015818.5-201ENST00000578659 356 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 MIR548Y-201ENST00000582739 110 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RN7SL246P-201ENST00000584467 296 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC015911.8-201ENST00000592517 560 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 VN1R79P-201ENST00000593540 513 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC006967.3-201ENST00000594086 1093 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AL049829.3-202ENST00000604278 711 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 TTR-205ENST00000613781 556 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 IMMTP1-201ENST00000435590 2219 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 MAPK10-347ENST00000641762 2856 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC068870.3-201ENST00000625077 2536 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC145138.1-201ENST00000512908 2851 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 Y_RNA.61-201ENST00000362835 102 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC003080.1-201ENST00000413552 767 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 MTATP6P27-201ENST00000416987 621 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 FKBP1AP3-201ENST00000423650 319 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 SKP1P3-201ENST00000429280 487 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 PDSS1P2-201ENST00000449397 678 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC104306.1-201ENST00000449702 371 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 PSPHP1-201ENST00000450062 261 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AL935212.3-201ENST00000450729 284 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 DNAJB5P1-201ENST00000454004 806 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AMD1P1-201ENST00000457220 922 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 ARPC3P2-201ENST00000457786 533 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC146507.1-201ENST00000468335 354 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 TRBV8-2-201ENST00000475637 270 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 RN7SL472P-201ENST00000492799 293 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC068531.1-201ENST00000502398 195 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC108941.1-201ENST00000502853 530 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 GAPDHP35-201ENST00000513369 976 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 IGKV3D-31-201ENST00000519131 281 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC109635.6-201ENST00000525487 1113 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC239860.2-201ENST00000525886 270 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 OR8Q1P-201ENST00000526467 655 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AP001189.2-201ENST00000527320 189 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms