Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 AC106785.4-201ENST00000569492 412 ntBASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 AL158050.2-201ENST00000605336 568 ntBASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 AF129408.1-201ENST00000608767 431 ntBASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 AC048344.4-201ENST00000619744 527 ntBASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 AP000943.4-201ENST00000622912 357 ntBASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 AC069542.2-201ENST00000624816 216 ntBASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 AL139805.2-201ENST00000455305 2433 ntBASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 OR4G1P-202ENST00000641173 1788 ntBASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
OTOP1Q7RTM1 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
OTOP1Q7RTM1 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
OTOP1Q7RTM1 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
OTOP1Q7RTM1 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
OTOP1Q7RTM1 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
OTOP1Q7RTM1 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
OTOP1Q7RTM1 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 TRAV35-201ENST00000390462 330 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 MIR541-201ENST00000401360 84 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC073464.3-201ENST00000422564 712 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 ATP5LP2-201ENST00000440646 311 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC023141.9-201ENST00000458734 412 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC117395.1-201ENST00000487390 403 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 RN7SL561P-201ENST00000488553 281 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC114322.1-201ENST00000506771 926 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC026407.1-201ENST00000518369 204 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 OR4A42P-201ENST00000531397 938 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC092375.1-201ENST00000550410 637 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC007225.2-201ENST00000562529 256 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 MIR4489-201ENST00000578869 62 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC009237.12-201ENST00000604755 742 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 SDR42E1P1-201ENST00000611327 477 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 OR1N1-202ENST00000619659 939 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AL354718.1-201ENST00000619764 589 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AP001264.1-201ENST00000620602 703 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 LINC00216-201ENST00000623548 1126 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AL445984.1-201ENST00000637834 659 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC027575.3-201ENST00000583058 2747 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AP001157.1-201ENST00000550837 2339 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 SHQ1P1-201ENST00000437111 1544 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 NEK2P4-201ENST00000425793 1329 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AL512310.3-201ENST00000547023 1335 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC119674.1-204ENST00000641348 1343 ntBASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
OTOP1Q7RTM1 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
OTOP1Q7RTM1 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
OTOP1Q7RTM1 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
OTOP1Q7RTM1 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.51□□□□□ -1.21
OTOP1Q7RTM1 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
OTOP1Q7RTM1 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
OTOP1Q7RTM1 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.51□□□□□ -1.21
OTOP1Q7RTM1 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
OTOP1Q7RTM1 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
OTOP1Q7RTM1 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.51□□□□□ -1.21
OTOP1Q7RTM1 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
OTOP1Q7RTM1 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms