Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC013488.1-201ENST00000526618 1838 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC105235.1-201ENST00000623208 1816 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 SAMMSON-210ENST00000641260 1308 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC027575.3-201ENST00000583058 2747 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 COX6B1P3-201ENST00000312310 260 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 RN7SKP15-201ENST00000364742 309 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 RN7SKP240-201ENST00000410583 375 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 LDHAP2-201ENST00000437325 985 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 RPL12P11-201ENST00000439970 501 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AMYP1-201ENST00000440059 1023 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 HMGN1P2-201ENST00000445197 310 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 RBMY2AP-201ENST00000445405 1157 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 RBMY2CP-201ENST00000448575 1157 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 RBMY2DP-202ENST00000448881 1157 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 VN1R38P-201ENST00000450265 887 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 RBMY2BP-202ENST00000451071 1156 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 RPL34P33-201ENST00000486062 334 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 IGKV3D-25-201ENST00000519599 235 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AL121579.2-201ENST00000555466 590 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC092332.1-201ENST00000563684 829 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 MRPS21P8-201ENST00000569196 235 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 RN7SL261P-201ENST00000613441 282 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AL138960.1-201ENST00000613838 513 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 MIR7159-201ENST00000620587 66 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 AC069542.2-201ENST00000624816 216 ntBASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 RNA5SP110-201ENST00000362638 115 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 RN7SKP77-201ENST00000363261 353 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 SNORA11.3-201ENST00000408471 128 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 SNORA77.2-201ENST00000408571 112 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 U3.43-201ENST00000410734 213 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 AC079807.1-201ENST00000429993 481 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 AL451136.1-201ENST00000435399 325 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 RN7SKP35-201ENST00000517210 151 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 AP001858.2-201ENST00000536213 601 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 AC090115.2-201ENST00000548060 883 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 AC005726.4-201ENST00000582858 458 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 SNORA11.6-201ENST00000619030 128 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 FAM27E2-201ENST00000619668 403 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms