Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH1Q08174 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH1Q08174 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 AL357556.1-201ENST00000421884 1388 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AL391994.1-201ENST00000254724 282 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 Y_RNA.41-201ENST00000362646 102 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 U3.4-201ENST00000363352 213 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 snoZ40.1-201ENST00000364540 72 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH1Q08174 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 RN7SKP225-201ENST00000410405 352 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 CDK8P2-201ENST00000415020 547 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 TAF13P2-201ENST00000416876 286 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 MTCYBP38-201ENST00000417160 1123 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PCDH1Q08174 IPPKP1-201ENST00000422501 768 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 GYG1P2-201ENST00000426437 1006 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC244505.2-201ENST00000435089 759 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH1Q08174 CFTRP1-201ENST00000456646 183 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 CCNJP2-201ENST00000457810 1163 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 GAPDHP36-201ENST00000480688 918 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 RN7SL124P-201ENST00000498656 285 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AC004069.2-201ENST00000505438 1114 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 RPL37-205ENST00000509877 637 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC013701.1-201ENST00000522657 465 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AL139174.1-201ENST00000531489 886 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AHI1-217ENST00000534469 680 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC016957.1-201ENST00000534895 309 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AL355076.3-201ENST00000555838 587 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AP005205.1-201ENST00000563503 508 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC083760.1-201ENST00000589621 670 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC004852.1-201ENST00000605206 154 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 AC006270.3-201ENST00000605967 1036 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 U47924.1-201ENST00000606539 434 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AC008498.1-201ENST00000613012 531 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AC073569.3-201ENST00000619055 682 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 MIR8089-201ENST00000620165 82 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AC010435.1-201ENST00000623353 1177 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AC093648.1-201ENST00000623546 606 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AC130448.2-201ENST00000624082 374 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AL353608.4-201ENST00000624487 1188 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH1Q08174 SNORA43.5-201ENST00000631270 138 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 MIR4278-201ENST00000636094 69 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 GTF2IP1-202ENST00000614592 2047 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH1Q08174 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PCDH1Q08174 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH1Q08174 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
PCDH1Q08174 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH1Q08174 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH1Q08174 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH1Q08174 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PCDH1Q08174 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH1Q08174 AL157831.2-201ENST00000564681 3095 ntBASIC7.26□□□□□ -1.25
PCDH1Q08174 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH1Q08174 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH1Q08174 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH1Q08174 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms