Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC092593.2-201ENST00000513866 913 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 AL049872.1-201ENST00000556323 322 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.12□□□□□ -1.27
COL4A5P29400 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.12□□□□□ -1.27
COL4A5P29400 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.12□□□□□ -1.27
COL4A5P29400 AC092692.1-201ENST00000623625 2595 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
COL4A5P29400 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
COL4A5P29400 AL359091.1-201ENST00000449048 1734 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 AF131215.2-201ENST00000531549 1710 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A5P29400 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A5P29400 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A5P29400 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A5P29400 COL6A4P1-202ENST00000487147 4317 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A5P29400 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A5P29400 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A5P29400 OFD1P17-201ENST00000437639 3018 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A5P29400 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A5P29400 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A5P29400 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A5P29400 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A5P29400 RPS27P18-201ENST00000431701 247 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A5P29400 AURKAPS1-201ENST00000451805 1212 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.12□□□□□ -1.27
COL4A5P29400 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A5P29400 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
COL4A5P29400 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.12□□□□□ -1.27
COL4A5P29400 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A5P29400 IGBP1P1-201ENST00000554337 1009 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 GARSP1-201ENST00000570895 719 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A5P29400 AL139407.1-201ENST00000613826 1175 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 AC007683.2-201ENST00000624681 714 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 MRRFP1-201ENST00000435941 1675 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL4A5P29400 GTF2IP4-201ENST00000453092 2054 ntBASIC7.11□□□□□ -1.27
COL4A5P29400 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A5P29400 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.11□□□□□ -1.27
COL4A5P29400 AP002370.1-201ENST00000528055 1602 ntBASIC7.11□□□□□ -1.27
COL4A5P29400 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL4A5P29400 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A5P29400 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
COL4A5P29400 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.11□□□□□ -1.27
COL4A5P29400 AP002364.1-201ENST00000623330 3386 ntBASIC7.11□□□□□ -1.27
COL4A5P29400 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A5P29400 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A5P29400 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL4A5P29400 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
COL4A5P29400 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL4A5P29400 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL4A5P29400 AL159987.1-201ENST00000347911 293 ntBASIC7.11□□□□□ -1.27
COL4A5P29400 RN7SKP115-201ENST00000363177 317 ntBASIC7.11□□□□□ -1.27
COL4A5P29400 RNA5SP131-201ENST00000365452 119 ntBASIC7.11□□□□□ -1.27
COL4A5P29400 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.11□□□□□ -1.27
COL4A5P29400 AC005297.1-201ENST00000444765 862 ntBASIC7.11□□□□□ -1.27
COL4A5P29400 RPL23AP60-201ENST00000450011 454 ntBASIC7.11□□□□□ -1.27
COL4A5P29400 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.11□□□□□ -1.27
COL4A5P29400 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.11□□□□□ -1.27
COL4A5P29400 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.11□□□□□ -1.27
COL4A5P29400 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.11□□□□□ -1.27
COL4A5P29400 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.11□□□□□ -1.27
COL4A5P29400 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.11□□□□□ -1.27
COL4A5P29400 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.11□□□□□ -1.27
COL4A5P29400 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A5P29400 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A5P29400 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A5P29400 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A5P29400 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A5P29400 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.11□□□□□ -1.27
COL4A5P29400 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.11□□□□□ -1.27
COL4A5P29400 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A5P29400 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A5P29400 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A5P29400 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A5P29400 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A5P29400 AC105749.1-201ENST00000631338 2008 ntBASIC7.1□□□□□ -1.27
COL4A5P29400 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.1□□□□□ -1.27
COL4A5P29400 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.1□□□□□ -1.27
COL4A5P29400 AL121835.1-201ENST00000404250 354 ntBASIC7.1□□□□□ -1.27
COL4A5P29400 AC099677.3-201ENST00000427081 395 ntBASIC7.1□□□□□ -1.27
COL4A5P29400 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.1□□□□□ -1.27
COL4A5P29400 AC112187.1-201ENST00000455837 479 ntBASIC7.1□□□□□ -1.27
COL4A5P29400 RN7SL172P-201ENST00000460535 303 ntBASIC7.1□□□□□ -1.27
COL4A5P29400 SUMO2P7-201ENST00000511179 285 ntBASIC7.1□□□□□ -1.27
COL4A5P29400 AC021146.10-201ENST00000515628 706 ntBASIC7.1□□□□□ -1.27
COL4A5P29400 HSPE1P2-201ENST00000554777 306 ntBASIC7.1□□□□□ -1.27
COL4A5P29400 AL137246.2-201ENST00000613439 662 ntBASIC7.1□□□□□ -1.27
COL4A5P29400 AC008115.3-201ENST00000614874 549 ntBASIC7.1□□□□□ -1.27
COL4A5P29400 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A5P29400 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A5P29400 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A5P29400 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
COL4A5P29400 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
COL4A5P29400 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.1□□□□□ -1.27
COL4A5P29400 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms