Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 RPL35AP3-201ENST00000414680 288 ntBASIC8.52□□□□□ -1.05
ATF3P18847 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.52□□□□□ -1.05
ATF3P18847 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC8.52□□□□□ -1.05
ATF3P18847 CFL1P1-202ENST00000432948 411 ntBASIC8.52□□□□□ -1.05
ATF3P18847 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.52□□□□□ -1.05
ATF3P18847 RANP2-201ENST00000456833 229 ntBASIC8.52□□□□□ -1.05
ATF3P18847 AP000926.3-201ENST00000497201 299 ntBASIC8.52□□□□□ -1.05
ATF3P18847 AC093763.2-201ENST00000505334 1223 ntBASIC8.52□□□□□ -1.05
ATF3P18847 AC006499.3-201ENST00000506077 748 ntBASIC8.52□□□□□ -1.05
ATF3P18847 AC138866.2-201ENST00000508650 584 ntBASIC8.52□□□□□ -1.05
ATF3P18847 GAPDHP71-201ENST00000511530 1003 ntBASIC8.52□□□□□ -1.05
ATF3P18847 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.52□□□□□ -1.05
ATF3P18847 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.52□□□□□ -1.05
ATF3P18847 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC8.52□□□□□ -1.05
ATF3P18847 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC8.52□□□□□ -1.05
ATF3P18847 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.52□□□□□ -1.05
ATF3P18847 AC015802.2-201ENST00000589690 189 ntBASIC8.52□□□□□ -1.05
ATF3P18847 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC8.52□□□□□ -1.05
ATF3P18847 AP005212.4-201ENST00000614206 710 ntBASIC8.52□□□□□ -1.05
ATF3P18847 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.52□□□□□ -1.05
ATF3P18847 TSHZ2-205ENST00000626626 670 ntBASIC8.52□□□□□ -1.05
ATF3P18847 AL132640.3-201ENST00000630473 177 ntBASIC8.52□□□□□ -1.05
ATF3P18847 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.52□□□□□ -1.05
ATF3P18847 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ATF3P18847 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
ATF3P18847 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ATF3P18847 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ATF3P18847 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC8.52□□□□□ -1.05
ATF3P18847 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ATF3P18847 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC8.52□□□□□ -1.05
ATF3P18847 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ATF3P18847 AC079753.1-201ENST00000623243 3868 ntBASIC8.52□□□□□ -1.05
ATF3P18847 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
ATF3P18847 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.52□□□□□ -1.05
ATF3P18847 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
ATF3P18847 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
ATF3P18847 AC241584.2-201ENST00000637142 2090 ntBASIC8.52□□□□□ -1.05
ATF3P18847 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC8.52□□□□□ -1.05
ATF3P18847 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ATF3P18847 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 Z93929.1-201ENST00000418200 1475 ntBASIC8.51□□□□□ -1.05
ATF3P18847 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
ATF3P18847 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
ATF3P18847 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC8.51□□□□□ -1.05
ATF3P18847 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.51□□□□□ -1.05
ATF3P18847 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
ATF3P18847 AL096829.1-201ENST00000413677 457 ntBASIC8.51□□□□□ -1.05
ATF3P18847 BMS1P17-202ENST00000416720 316 ntBASIC8.51□□□□□ -1.05
ATF3P18847 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.51□□□□□ -1.05
ATF3P18847 RN7SL184P-201ENST00000488308 297 ntBASIC8.51□□□□□ -1.05
ATF3P18847 RNU6-964P-201ENST00000516524 69 ntBASIC8.51□□□□□ -1.05
ATF3P18847 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.51□□□□□ -1.05
ATF3P18847 AC006530.1-201ENST00000555980 571 ntBASIC8.51□□□□□ -1.05
ATF3P18847 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC8.51□□□□□ -1.05
ATF3P18847 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
ATF3P18847 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC8.51□□□□□ -1.05
ATF3P18847 AC024940.4-201ENST00000605507 246 ntBASIC8.51□□□□□ -1.05
ATF3P18847 AL357562.1-201ENST00000624911 609 ntBASIC8.51□□□□□ -1.05
ATF3P18847 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
ATF3P18847 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.51□□□□□ -1.05
ATF3P18847 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 AC012254.3-201ENST00000591183 2117 ntBASIC8.51□□□□□ -1.05
ATF3P18847 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
ATF3P18847 AC008937.3-201ENST00000606813 1700 ntBASIC8.51□□□□□ -1.05
ATF3P18847 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ATF3P18847 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
ATF3P18847 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
ATF3P18847 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.5□□□□□ -1.05
ATF3P18847 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.5□□□□□ -1.05
ATF3P18847 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
ATF3P18847 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ATF3P18847 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.5□□□□□ -1.05
ATF3P18847 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
ATF3P18847 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
ATF3P18847 MRRFP1-201ENST00000435941 1675 ntBASIC8.5□□□□□ -1.05
ATF3P18847 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
ATF3P18847 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
ATF3P18847 AC011379.1-201ENST00000508713 3025 ntBASIC8.5□□□□□ -1.05
ATF3P18847 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
ATF3P18847 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ATF3P18847 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC8.5□□□□□ -1.05
ATF3P18847 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ATF3P18847 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ATF3P18847 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.5□□□□□ -1.05
ATF3P18847 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
ATF3P18847 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ATF3P18847 AL391422.1-201ENST00000402155 436 ntBASIC8.5□□□□□ -1.05
ATF3P18847 RN7SKP59-201ENST00000410520 314 ntBASIC8.5□□□□□ -1.05
ATF3P18847 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC8.5□□□□□ -1.05
ATF3P18847 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms