Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CHGBP05060 RN7SL714P-201ENST00000487050 298 ntBASIC7.6□□□□□ -1.19
CHGBP05060 AC093801.2-201ENST00000503966 1050 ntBASIC7.6□□□□□ -1.19
CHGBP05060 SNX18P24-201ENST00000505249 671 ntBASIC7.6□□□□□ -1.19
CHGBP05060 MTND3P24-201ENST00000506306 329 ntBASIC7.6□□□□□ -1.19
CHGBP05060 AC113398.2-201ENST00000507630 558 ntBASIC7.6□□□□□ -1.19
CHGBP05060 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC7.6□□□□□ -1.19
CHGBP05060 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.6□□□□□ -1.19
CHGBP05060 IGHV4-55-201ENST00000520889 368 ntBASIC7.6□□□□□ -1.19
CHGBP05060 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.6□□□□□ -1.19
CHGBP05060 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.6□□□□□ -1.19
CHGBP05060 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.6□□□□□ -1.19
CHGBP05060 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.6□□□□□ -1.19
CHGBP05060 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.6□□□□□ -1.19
CHGBP05060 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC7.6□□□□□ -1.19
CHGBP05060 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.6□□□□□ -1.19
CHGBP05060 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.6□□□□□ -1.19
CHGBP05060 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.6□□□□□ -1.19
CHGBP05060 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.6□□□□□ -1.19
CHGBP05060 AC124916.2-201ENST00000604416 224 ntBASIC7.6□□□□□ -1.19
CHGBP05060 AC097065.2-201ENST00000608159 533 ntBASIC7.6□□□□□ -1.19
CHGBP05060 AC135803.1-201ENST00000608748 565 ntBASIC7.6□□□□□ -1.19
CHGBP05060 AP002345.2-201ENST00000609961 904 ntBASIC7.6□□□□□ -1.19
CHGBP05060 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.6□□□□□ -1.19
CHGBP05060 RFC1-217ENST00000639695 867 ntTSL 5 BASIC7.6□□□□□ -1.19
CHGBP05060 OR8A1-204ENST00000642111 1145 ntBASIC7.6□□□□□ -1.19
CHGBP05060 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.6□□□□□ -1.19
CHGBP05060 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CHGBP05060 AKAP17BP-201ENST00000431706 2719 ntBASIC7.6□□□□□ -1.19
CHGBP05060 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CHGBP05060 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CHGBP05060 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CHGBP05060 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CHGBP05060 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CHGBP05060 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CHGBP05060 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.6□□□□□ -1.19
CHGBP05060 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CHGBP05060 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHGBP05060 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CHGBP05060 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CHGBP05060 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
CHGBP05060 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHGBP05060 AC073342.2-201ENST00000595842 1800 ntBASIC7.59□□□□□ -1.19
CHGBP05060 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
CHGBP05060 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHGBP05060 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CHGBP05060 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CHGBP05060 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.59□□□□□ -1.19
CHGBP05060 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHGBP05060 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHGBP05060 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.59□□□□□ -1.19
CHGBP05060 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHGBP05060 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
CHGBP05060 AC099535.1-201ENST00000408928 371 ntBASIC7.59□□□□□ -1.19
CHGBP05060 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.59□□□□□ -1.19
CHGBP05060 BX119904.3-201ENST00000428194 957 ntBASIC7.59□□□□□ -1.19
CHGBP05060 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.59□□□□□ -1.19
CHGBP05060 EMC3-AS1-205ENST00000438698 534 ntBASIC7.59□□□□□ -1.19
CHGBP05060 SOCS5P1-201ENST00000440415 949 ntBASIC7.59□□□□□ -1.19
CHGBP05060 ATP5G1P3-201ENST00000463301 410 ntBASIC7.59□□□□□ -1.19
CHGBP05060 RPL34P33-201ENST00000486062 334 ntBASIC7.59□□□□□ -1.19
CHGBP05060 RPS27P20-201ENST00000492051 246 ntBASIC7.59□□□□□ -1.19
CHGBP05060 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC7.59□□□□□ -1.19
CHGBP05060 OR7E99P-201ENST00000505750 922 ntBASIC7.59□□□□□ -1.19
CHGBP05060 SNX18P25-201ENST00000510539 758 ntBASIC7.59□□□□□ -1.19
CHGBP05060 C1GALT1P2-201ENST00000510813 1104 ntBASIC7.59□□□□□ -1.19
CHGBP05060 HSD3BP3-201ENST00000514706 994 ntBASIC7.59□□□□□ -1.19
CHGBP05060 RN7SKP35-201ENST00000517210 151 ntBASIC7.59□□□□□ -1.19
CHGBP05060 CYCSP25-201ENST00000525280 316 ntBASIC7.59□□□□□ -1.19
CHGBP05060 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.59□□□□□ -1.19
CHGBP05060 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.59□□□□□ -1.19
CHGBP05060 MIR3189-201ENST00000578735 73 ntBASIC7.59□□□□□ -1.19
CHGBP05060 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
CHGBP05060 MIR4701-201ENST00000583094 63 ntBASIC7.59□□□□□ -1.19
CHGBP05060 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.59□□□□□ -1.19
CHGBP05060 AC040174.2-201ENST00000602701 465 ntBASIC7.59□□□□□ -1.19
CHGBP05060 SMIM12P1-201ENST00000603004 274 ntBASIC7.59□□□□□ -1.19
CHGBP05060 AC084782.3-201ENST00000612282 578 ntBASIC7.59□□□□□ -1.19
CHGBP05060 AL132640.3-201ENST00000630473 177 ntBASIC7.59□□□□□ -1.19
CHGBP05060 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.59□□□□□ -1.19
CHGBP05060 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHGBP05060 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.59□□□□□ -1.19
CHGBP05060 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.59□□□□□ -1.19
CHGBP05060 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHGBP05060 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHGBP05060 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CHGBP05060 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.2
CHGBP05060 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CHGBP05060 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CHGBP05060 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
CHGBP05060 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHGBP05060 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHGBP05060 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.58□□□□□ -1.2
CHGBP05060 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHGBP05060 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CHGBP05060 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CHGBP05060 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.58□□□□□ -1.2
CHGBP05060 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.58□□□□□ -1.2
CHGBP05060 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHGBP05060 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms