Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.77□□□□□ -1.33
CHRNA1P02708 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.77□□□□□ -1.33
CHRNA1P02708 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.77□□□□□ -1.33
CHRNA1P02708 AC135626.1-201ENST00000556983 435 ntBASIC6.77□□□□□ -1.33
CHRNA1P02708 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.77□□□□□ -1.33
CHRNA1P02708 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.77□□□□□ -1.33
CHRNA1P02708 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.77□□□□□ -1.33
CHRNA1P02708 MIR6793-201ENST00000612376 63 ntBASIC6.77□□□□□ -1.33
CHRNA1P02708 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.77□□□□□ -1.33
CHRNA1P02708 AC105235.1-201ENST00000623208 1816 ntBASIC6.77□□□□□ -1.33
CHRNA1P02708 AC025809.2-201ENST00000625085 1802 ntBASIC6.77□□□□□ -1.33
CHRNA1P02708 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CHRNA1P02708 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.77□□□□□ -1.33
CHRNA1P02708 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CHRNA1P02708 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CHRNA1P02708 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CHRNA1P02708 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CHRNA1P02708 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CHRNA1P02708 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CHRNA1P02708 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.77□□□□□ -1.33
CHRNA1P02708 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.76□□□□□ -1.33
CHRNA1P02708 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CHRNA1P02708 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.76□□□□□ -1.33
CHRNA1P02708 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CHRNA1P02708 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.76□□□□□ -1.33
CHRNA1P02708 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CHRNA1P02708 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CHRNA1P02708 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
CHRNA1P02708 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.76□□□□□ -1.33
CHRNA1P02708 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CHRNA1P02708 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CHRNA1P02708 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CHRNA1P02708 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CHRNA1P02708 OR11H13P-201ENST00000359695 979 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 RNA5SP350-201ENST00000363298 111 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 SNORA43.1-201ENST00000364863 140 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 RN7SKP292-201ENST00000365522 317 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.76□□□□□ -1.33
CHRNA1P02708 AL451046.1-201ENST00000406097 534 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 MIR1203-201ENST00000408812 85 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.76□□□□□ -1.33
CHRNA1P02708 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.76□□□□□ -1.33
CHRNA1P02708 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.76□□□□□ -1.33
CHRNA1P02708 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 GAPDHP75-201ENST00000433910 943 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.76□□□□□ -1.33
CHRNA1P02708 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.76□□□□□ -1.33
CHRNA1P02708 AL161636.2-201ENST00000445179 927 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.76□□□□□ -1.33
CHRNA1P02708 ZNF619P1-201ENST00000446539 752 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 AC092967.1-201ENST00000449016 481 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 MGAT2P1-201ENST00000449718 797 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 VN1R38P-201ENST00000450265 887 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.76□□□□□ -1.33
CHRNA1P02708 AC027544.3-201ENST00000535082 757 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 AC092121.1-201ENST00000569452 202 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.76□□□□□ -1.33
CHRNA1P02708 AC020978.7-201ENST00000575953 1187 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 AC005244.1-201ENST00000582566 339 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.76□□□□□ -1.33
CHRNA1P02708 AC008555.7-201ENST00000605008 583 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 AC024255.1-201ENST00000614376 102 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 AC005899.7-201ENST00000618199 588 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.76□□□□□ -1.33
CHRNA1P02708 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.76□□□□□ -1.33
CHRNA1P02708 OR7A1P-202ENST00000641542 1158 ntBASIC6.76□□□□□ -1.33
CHRNA1P02708 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CHRNA1P02708 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.76□□□□□ -1.33
CHRNA1P02708 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CHRNA1P02708 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CHRNA1P02708 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHRNA1P02708 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.75□□□□□ -1.33
CHRNA1P02708 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHRNA1P02708 AC119674.1-202ENST00000641333 1860 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.75□□□□□ -1.33
CHRNA1P02708 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.75□□□□□ -1.33
CHRNA1P02708 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHRNA1P02708 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.75□□□□□ -1.33
CHRNA1P02708 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
CHRNA1P02708 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.75□□□□□ -1.33
CHRNA1P02708 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHRNA1P02708 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHRNA1P02708 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
CHRNA1P02708 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.75□□□□□ -1.33
CHRNA1P02708 AC079355.1-201ENST00000421770 223 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 RPL12P16-201ENST00000431098 498 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 PCBP2P1-201ENST00000437262 977 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 AC016908.1-201ENST00000442571 1219 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 TRIM60P16-201ENST00000444048 694 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.75□□□□□ -1.33
CHRNA1P02708 AP006222.1-205ENST00000450734 457 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHRNA1P02708 SNX18P26-201ENST00000458433 740 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 SCARNA18.1-201ENST00000516330 83 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHRNA1P02708 OR5D2P-201ENST00000524390 911 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.75□□□□□ -1.33
CHRNA1P02708 AC073916.1-201ENST00000545095 130 ntBASIC6.75□□□□□ -1.33
CHRNA1P02708 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.75□□□□□ -1.33
CHRNA1P02708 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms