Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.69□□□□□ -1.5
SPTA1P02549 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.69□□□□□ -1.5
SPTA1P02549 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.69□□□□□ -1.5
SPTA1P02549 AL157899.1-201ENST00000604110 936 ntBASIC5.69□□□□□ -1.5
SPTA1P02549 RPSAP73-201ENST00000614820 330 ntBASIC5.69□□□□□ -1.5
SPTA1P02549 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC5.69□□□□□ -1.5
SPTA1P02549 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.69□□□□□ -1.5
SPTA1P02549 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
SPTA1P02549 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.69□□□□□ -1.5
SPTA1P02549 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SPTA1P02549 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SPTA1P02549 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SPTA1P02549 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SPTA1P02549 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 CTH-203ENST00000411986 2044 ntTSL 2 BASIC5.68□□□□□ -1.5
SPTA1P02549 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.68□□□□□ -1.5
SPTA1P02549 PSG10P-201ENST00000501199 1500 ntBASIC5.68□□□□□ -1.5
SPTA1P02549 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 MIR550A3-201ENST00000390735 95 ntBASIC5.68□□□□□ -1.5
SPTA1P02549 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.68□□□□□ -1.5
SPTA1P02549 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.68□□□□□ -1.5
SPTA1P02549 AC013399.1-201ENST00000450311 418 ntBASIC5.68□□□□□ -1.5
SPTA1P02549 RNA5SP438-201ENST00000516561 112 ntBASIC5.68□□□□□ -1.5
SPTA1P02549 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.68□□□□□ -1.5
SPTA1P02549 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.68□□□□□ -1.5
SPTA1P02549 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.68□□□□□ -1.5
SPTA1P02549 AL139407.1-201ENST00000613826 1175 ntBASIC5.68□□□□□ -1.5
SPTA1P02549 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.68□□□□□ -1.5
SPTA1P02549 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.68□□□□□ -1.5
SPTA1P02549 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 HCG18-244ENST00000602516 2890 ntBASIC5.68□□□□□ -1.5
SPTA1P02549 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.68□□□□□ -1.5
SPTA1P02549 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC5.68□□□□□ -1.5
SPTA1P02549 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC5.68□□□□□ -1.5
SPTA1P02549 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
SPTA1P02549 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.68□□□□□ -1.5
SPTA1P02549 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 AL512637.1-201ENST00000439523 1231 ntBASIC5.68□□□□□ -1.5
SPTA1P02549 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 SETP21-201ENST00000514799 892 ntBASIC5.68□□□□□ -1.5
SPTA1P02549 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.68□□□□□ -1.5
SPTA1P02549 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.68□□□□□ -1.5
SPTA1P02549 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.68□□□□□ -1.5
SPTA1P02549 AL589674.2-201ENST00000604304 337 ntBASIC5.68□□□□□ -1.5
SPTA1P02549 AC104695.2-201ENST00000605056 775 ntBASIC5.68□□□□□ -1.5
SPTA1P02549 AC010998.3-201ENST00000613871 631 ntBASIC5.68□□□□□ -1.5
SPTA1P02549 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SPTA1P02549 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SPTA1P02549 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC5.68□□□□□ -1.5
SPTA1P02549 AL592429.1-201ENST00000403909 1473 ntBASIC5.68□□□□□ -1.5
SPTA1P02549 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTA1P02549 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC5.68□□□□□ -1.5
SPTA1P02549 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SPTA1P02549 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.68□□□□□ -1.5
SPTA1P02549 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SPTA1P02549 SNORD16-201ENST00000362803 99 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.67□□□□□ -1.5
SPTA1P02549 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.67□□□□□ -1.5
SPTA1P02549 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.67□□□□□ -1.5
SPTA1P02549 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.67□□□□□ -1.5
SPTA1P02549 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.67□□□□□ -1.5
SPTA1P02549 AC091768.1-201ENST00000609258 930 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 AC131009.3-201ENST00000621809 287 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.67□□□□□ -1.5
SPTA1P02549 AC027279.4-201ENST00000624371 2072 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SPTA1P02549 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC5.67□□□□□ -1.5
SPTA1P02549 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SPTA1P02549 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC5.67□□□□□ -1.5
SPTA1P02549 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SPTA1P02549 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SPTA1P02549 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.67□□□□□ -1.5
SPTA1P02549 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SPTA1P02549 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SPTA1P02549 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms