Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
HCN1O60741 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.89□□□□□ -1.47
HCN1O60741 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.89□□□□□ -1.47
HCN1O60741 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
HCN1O60741 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HCN1O60741 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.89□□□□□ -1.47
HCN1O60741 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HCN1O60741 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HCN1O60741 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
HCN1O60741 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HCN1O60741 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HCN1O60741 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.89□□□□□ -1.47
HCN1O60741 RPL31P11-201ENST00000426558 1558 ntBASIC5.89□□□□□ -1.47
HCN1O60741 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
HCN1O60741 AP002512.4-202ENST00000641599 4530 ntBASIC5.88□□□□□ -1.47
HCN1O60741 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
HCN1O60741 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HCN1O60741 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 AC110373.1-201ENST00000505994 3505 ntBASIC5.88□□□□□ -1.47
HCN1O60741 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HCN1O60741 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 RNU1-65P-201ENST00000363919 148 ntBASIC5.88□□□□□ -1.47
HCN1O60741 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 RAB5CP1-201ENST00000395972 580 ntBASIC5.88□□□□□ -1.47
HCN1O60741 RN7SKP161-201ENST00000411110 305 ntBASIC5.88□□□□□ -1.47
HCN1O60741 RPL21P50-201ENST00000417698 477 ntBASIC5.88□□□□□ -1.47
HCN1O60741 RPL23AP85-201ENST00000421838 433 ntBASIC5.88□□□□□ -1.47
HCN1O60741 VN1R20P-201ENST00000425215 966 ntBASIC5.88□□□□□ -1.47
HCN1O60741 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
HCN1O60741 RPSAP40-201ENST00000442343 891 ntBASIC5.88□□□□□ -1.47
HCN1O60741 OR2L9P-201ENST00000444456 913 ntBASIC5.88□□□□□ -1.47
HCN1O60741 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.88□□□□□ -1.47
HCN1O60741 RN7SL552P-201ENST00000462094 276 ntBASIC5.88□□□□□ -1.47
HCN1O60741 AC114728.1-201ENST00000488289 483 ntBASIC5.88□□□□□ -1.47
HCN1O60741 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.88□□□□□ -1.47
HCN1O60741 RPL5P14-201ENST00000494197 878 ntBASIC5.88□□□□□ -1.47
HCN1O60741 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.88□□□□□ -1.47
HCN1O60741 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.88□□□□□ -1.47
HCN1O60741 AL133399.1-201ENST00000527476 298 ntBASIC5.88□□□□□ -1.47
HCN1O60741 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.88□□□□□ -1.47
HCN1O60741 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.88□□□□□ -1.47
HCN1O60741 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.88□□□□□ -1.47
HCN1O60741 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
HCN1O60741 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.88□□□□□ -1.47
HCN1O60741 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.88□□□□□ -1.47
HCN1O60741 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.88□□□□□ -1.47
HCN1O60741 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.88□□□□□ -1.47
HCN1O60741 AC073593.1-201ENST00000624500 411 ntBASIC5.88□□□□□ -1.47
HCN1O60741 AC069542.2-201ENST00000624816 216 ntBASIC5.88□□□□□ -1.47
HCN1O60741 AP001052.1-201ENST00000626421 99 ntBASIC5.88□□□□□ -1.47
HCN1O60741 AC111152.1-202ENST00000635848 339 ntBASIC5.88□□□□□ -1.47
HCN1O60741 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
HCN1O60741 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCN1O60741 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.87□□□□□ -1.47
HCN1O60741 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.87□□□□□ -1.47
HCN1O60741 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.87□□□□□ -1.47
HCN1O60741 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.87□□□□□ -1.47
HCN1O60741 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.87□□□□□ -1.47
HCN1O60741 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.87□□□□□ -1.47
HCN1O60741 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.87□□□□□ -1.47
HCN1O60741 RNA5SP77-201ENST00000365394 120 ntBASIC5.87□□□□□ -1.47
HCN1O60741 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 RNU11-201ENST00000387069 134 ntBASIC5.87□□□□□ -1.47
HCN1O60741 RBBP4P5-201ENST00000398583 1266 ntBASIC5.87□□□□□ -1.47
HCN1O60741 AL391419.1-201ENST00000398901 1275 ntBASIC5.87□□□□□ -1.47
HCN1O60741 MIR1275-201ENST00000408770 80 ntBASIC5.87□□□□□ -1.47
HCN1O60741 HMGA1P8-201ENST00000414130 321 ntBASIC5.87□□□□□ -1.47
HCN1O60741 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.87□□□□□ -1.47
HCN1O60741 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.87□□□□□ -1.47
HCN1O60741 GAPDHP34-201ENST00000432112 823 ntBASIC5.87□□□□□ -1.47
HCN1O60741 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.87□□□□□ -1.47
HCN1O60741 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.87□□□□□ -1.47
HCN1O60741 PCNPP2-201ENST00000441651 455 ntBASIC5.87□□□□□ -1.47
HCN1O60741 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.87□□□□□ -1.47
HCN1O60741 AC068491.1-201ENST00000449539 1241 ntBASIC5.87□□□□□ -1.47
HCN1O60741 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.87□□□□□ -1.47
HCN1O60741 OR7E22P-201ENST00000478335 1035 ntBASIC5.87□□□□□ -1.47
HCN1O60741 AC022206.1-201ENST00000495947 347 ntBASIC5.87□□□□□ -1.47
HCN1O60741 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.87□□□□□ -1.47
HCN1O60741 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.87□□□□□ -1.47
HCN1O60741 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.87□□□□□ -1.47
HCN1O60741 AC026826.3-201ENST00000561747 158 ntBASIC5.87□□□□□ -1.47
HCN1O60741 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.87□□□□□ -1.47
HCN1O60741 AL360012.1-201ENST00000602813 131 ntBASIC5.87□□□□□ -1.47
HCN1O60741 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.87□□□□□ -1.47
HCN1O60741 LINC02495-203ENST00000636704 242 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms