Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AC092279.2-201ENST00000623742 2189 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AC092111.2-201ENST00000611627 1414 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AL133320.1-201ENST00000621423 2352 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 RNU1-87P-201ENST00000363727 170 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AL034403.1-201ENST00000399414 885 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AP000357.1-201ENST00000409926 1165 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 HMGB3P31-201ENST00000413333 595 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 QRSL1P2-201ENST00000418582 964 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AL593856.1-201ENST00000419949 805 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 PTP4A1P5-201ENST00000420305 455 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AC093084.1-201ENST00000424233 687 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 USP9YP14-201ENST00000430663 563 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 Z83313.1-201ENST00000433780 718 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 PA2G4P6-201ENST00000438325 1197 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AC009961.3-201ENST00000449832 765 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 NECAP1P2-201ENST00000455668 727 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 RN7SL177P-201ENST00000476596 299 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AL117351.2-201ENST00000513571 157 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 C1GALT1P3-201ENST00000522049 819 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 PDCL2P2-201ENST00000533651 189 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AC012557.1-201ENST00000607115 611 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 AP003392.5-201ENST00000607857 415 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 VN1R74P-201ENST00000613259 503 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 CCDC162P-202ENST00000368966 6751 ntBASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TMEM88BA6NKF7 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 AC245060.6-201ENST00000624350 8420 ntBASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 AL049737.1-201ENST00000413920 1403 ntBASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 TRIM53BP-201ENST00000532912 1720 ntBASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 RNU6-304P-201ENST00000364855 107 ntBASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 ERHP2-201ENST00000402323 299 ntBASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 LINC01347-201ENST00000417964 355 ntBASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 MAPK6PS6-201ENST00000420752 1053 ntBASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 RPL12P12-201ENST00000424633 501 ntBASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 AC104843.2-201ENST00000427666 297 ntBASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.3□□□□□ -1.08
TMEM88BA6NKF7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms