Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MIR6889-201ENST00000613185 59 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC010168.2-201ENST00000562691 5428 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AL136520.1-201ENST00000600311 1322 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC009120.2-204ENST00000621548 2032 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 AC217777.1-201ENST00000570034 1471 ntBASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC104162.1-201ENST00000430831 2382 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 PABPC1P8-201ENST00000452851 2086 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 OR7A2P-201ENST00000304105 930 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AL049697.3-201ENST00000406493 982 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AL353692.2-201ENST00000407054 335 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC234781.4-201ENST00000419384 244 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 MORF4L1P7-201ENST00000426038 703 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 GAPDHP75-201ENST00000433910 943 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 GAPDHP37-201ENST00000442317 968 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 SULT1D1P-201ENST00000458020 882 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC005165.2-201ENST00000466070 380 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 UGT2A3P7-201ENST00000510485 734 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 OR52H2P-201ENST00000514607 902 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC106785.3-201ENST00000564064 847 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 BNIP3P27-201ENST00000599991 412 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AL359704.2-201ENST00000604335 521 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 GAPDHP41-201ENST00000613707 975 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 AC004241.2-201ENST00000614562 444 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 OR2AH1P-202ENST00000641232 2744 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 KARSP1-201ENST00000451871 1752 ntBASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
COL4A3BPQ9Y5P4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 RNA5SP85-201ENST00000365378 119 ntBASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 RPS26P13-201ENST00000419030 330 ntBASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AC096632.2-201ENST00000438139 1239 ntBASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 UBBP5-201ENST00000446970 266 ntBASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AP000547.1-201ENST00000454360 617 ntBASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms