Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC106028.5-201ENST00000610332 395 ntBASIC10.49□□□□□ -0.73
PHF8Q9UPP1 AL391903.2-201ENST00000614532 247 ntBASIC10.49□□□□□ -0.73
PHF8Q9UPP1 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PHF8Q9UPP1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC10.49□□□□□ -0.73
PHF8Q9UPP1 AL451054.1-201ENST00000621770 772 ntBASIC10.49□□□□□ -0.73
PHF8Q9UPP1 METAP1-212ENST00000625963 147 ntTSL 5 BASIC10.49□□□□□ -0.73
PHF8Q9UPP1 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PHF8Q9UPP1 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC10.49□□□□□ -0.73
PHF8Q9UPP1 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PHF8Q9UPP1 MRRFP1-201ENST00000435941 1675 ntBASIC10.49□□□□□ -0.73
PHF8Q9UPP1 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC10.49□□□□□ -0.73
PHF8Q9UPP1 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
PHF8Q9UPP1 AL512353.3-201ENST00000417517 1326 ntBASIC10.49□□□□□ -0.73
PHF8Q9UPP1 SAMM50P1-201ENST00000455403 1399 ntBASIC10.49□□□□□ -0.73
PHF8Q9UPP1 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
PHF8Q9UPP1 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PHF8Q9UPP1 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
PHF8Q9UPP1 WASF5P-205ENST00000428639 1455 ntBASIC10.49□□□□□ -0.73
PHF8Q9UPP1 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC108099.1-201ENST00000564402 3258 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC016722.3-201ENST00000568862 2463 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 BRAFP1-201ENST00000445336 2703 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 Y_RNA.18-201ENST00000362461 102 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 Y_RNA.356-201ENST00000365475 113 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 RPS27AP11-201ENST00000402798 447 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AL157698.1-201ENST00000415190 1011 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AL354751.2-201ENST00000415471 210 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AL589794.1-201ENST00000424971 390 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 HSPD1P12-201ENST00000429127 1069 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 MTND4LP10-201ENST00000435146 291 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 MTND1P28-201ENST00000435623 950 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 TMX2P1-201ENST00000436507 708 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 PA2G4P6-201ENST00000438325 1197 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC005517.1-201ENST00000452091 489 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 RN7SL149P-201ENST00000465197 281 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 RN7SL233P-201ENST00000469988 277 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 RN7SL836P-201ENST00000476140 296 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 UBTFL6-201ENST00000477929 1024 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC114967.1-201ENST00000504890 259 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 HMGB1P44-201ENST00000508597 572 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 IGLVIV-59-201ENST00000520218 250 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 SNX18P27-201ENST00000523611 779 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AP003080.1-202ENST00000526526 915 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 NDUFA3P2-201ENST00000531434 232 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AP004833.3-201ENST00000531893 322 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AL133457.1-201ENST00000564251 987 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC009220.3-201ENST00000604318 586 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AL360085.1-201ENST00000604713 532 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 DYNC1I1-206ENST00000457059 2393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 AC005538.2-201ENST00000623215 1864 ntBASIC10.48□□□□□ -0.73
PHF8Q9UPP1 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PHF8Q9UPP1 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC10.47□□□□□ -0.73
PHF8Q9UPP1 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms