Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 RNA5SP375-201ENST00000362975 119 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 GNG5P2-201ENST00000372054 207 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 PTCD2P2-201ENST00000415579 1095 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AC245884.2-201ENST00000426257 404 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AL365220.1-201ENST00000432923 399 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AL356121.1-201ENST00000442911 156 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AC099670.1-201ENST00000455141 783 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AC004890.1-201ENST00000461005 181 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 RPL23AP40-201ENST00000487630 390 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 SNRPCP11-201ENST00000492453 205 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 MRPL57P6-201ENST00000506570 309 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AKAP17BP-201ENST00000431706 2719 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AC016583.1-201ENST00000624221 2431 ntBASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS29Q9UBQ0 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 SNORD1C-201ENST00000363315 78 ntBASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 MRPS21P3-201ENST00000436696 262 ntBASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AC124945.1-201ENST00000485133 188 ntBASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AC007603.3-201ENST00000636915 979 ntBASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 AC010325.3-201ENST00000641084 394 ntBASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms