Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 AC011260.1-201ENST00000578420 472 ntBASIC8.1□□□□□ -1.11
CCDC97Q96F63 AC090312.2-201ENST00000582687 378 ntBASIC8.1□□□□□ -1.11
CCDC97Q96F63 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC8.1□□□□□ -1.11
CCDC97Q96F63 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC8.1□□□□□ -1.11
CCDC97Q96F63 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC8.1□□□□□ -1.11
CCDC97Q96F63 AC004948.1-201ENST00000609858 672 ntBASIC8.1□□□□□ -1.11
CCDC97Q96F63 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC97Q96F63 AL157359.3-201ENST00000623771 217 ntBASIC8.1□□□□□ -1.11
CCDC97Q96F63 AC092184.1-201ENST00000625042 715 ntBASIC8.1□□□□□ -1.11
CCDC97Q96F63 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC8.1□□□□□ -1.11
CCDC97Q96F63 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.1□□□□□ -1.11
CCDC97Q96F63 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC97Q96F63 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC97Q96F63 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC97Q96F63 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.1□□□□□ -1.11
CCDC97Q96F63 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC97Q96F63 AL590065.1-201ENST00000603371 4774 ntBASIC8.1□□□□□ -1.11
CCDC97Q96F63 AP003119.3-201ENST00000566747 4192 ntBASIC8.1□□□□□ -1.11
CCDC97Q96F63 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.1□□□□□ -1.11
CCDC97Q96F63 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
CCDC97Q96F63 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC8.1□□□□□ -1.11
CCDC97Q96F63 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC8.1□□□□□ -1.11
CCDC97Q96F63 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC97Q96F63 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 SSXP3-201ENST00000442971 1300 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 SLC2A3P2-201ENST00000331747 1480 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 OR7E11P-202ENST00000642027 1491 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 RN7SKP48-201ENST00000365031 328 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 RNA5SP427-201ENST00000365323 119 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 OR52E6-202ENST00000379946 954 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 MIR137-201ENST00000385223 102 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 GLRX3P2-201ENST00000405027 1038 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 OR51A3P-201ENST00000413596 924 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 PPIAP17-201ENST00000438507 471 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 AP002383.1-201ENST00000439405 720 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 UBE2V1P5-201ENST00000440070 405 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 COX6CP18-201ENST00000448769 222 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 USP9YP10-201ENST00000454868 628 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 IMPA1P1-201ENST00000510718 842 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 USP9YP5-201ENST00000511770 630 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 RNU2-30P-201ENST00000516209 141 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 POLB-211ENST00000521492 786 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC112484.4-201ENST00000567253 811 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 MIR3680-2-201ENST00000578247 87 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 MIR3680-1-201ENST00000581433 87 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 BOLA2P1-201ENST00000584794 232 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 MIR7973-1-201ENST00000614683 76 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC026336.5-201ENST00000624455 738 ntBASIC8.09□□□□□ -1.11
CCDC97Q96F63 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC97Q96F63 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC97Q96F63 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms