Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 HNRNPCP8-201ENST00000528764 888 ntBASIC5.59□□□□□ -1.51
RFT1Q96AA3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.59□□□□□ -1.51
RFT1Q96AA3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.59□□□□□ -1.51
RFT1Q96AA3 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.59□□□□□ -1.51
RFT1Q96AA3 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFT1Q96AA3 AL121579.2-201ENST00000555466 590 ntBASIC5.59□□□□□ -1.51
RFT1Q96AA3 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
RFT1Q96AA3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.59□□□□□ -1.51
RFT1Q96AA3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.59□□□□□ -1.51
RFT1Q96AA3 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.59□□□□□ -1.51
RFT1Q96AA3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFT1Q96AA3 MTATP6P25-201ENST00000574491 261 ntBASIC5.59□□□□□ -1.51
RFT1Q96AA3 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.59□□□□□ -1.51
RFT1Q96AA3 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.59□□□□□ -1.51
RFT1Q96AA3 GLYATL1P2-202ENST00000588046 902 ntBASIC5.59□□□□□ -1.51
RFT1Q96AA3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.59□□□□□ -1.51
RFT1Q96AA3 SNORD96A-201ENST00000606577 79 ntBASIC5.59□□□□□ -1.51
RFT1Q96AA3 AL035425.4-201ENST00000624509 1063 ntBASIC5.59□□□□□ -1.51
RFT1Q96AA3 AC022726.2-201ENST00000634673 547 ntBASIC5.59□□□□□ -1.51
RFT1Q96AA3 AC000095.2-202ENST00000637415 154 ntBASIC5.59□□□□□ -1.51
RFT1Q96AA3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFT1Q96AA3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.59□□□□□ -1.51
RFT1Q96AA3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RFT1Q96AA3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
RFT1Q96AA3 AC022164.1-201ENST00000568767 2673 ntBASIC5.59□□□□□ -1.52
RFT1Q96AA3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RFT1Q96AA3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RFT1Q96AA3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.59□□□□□ -1.52
RFT1Q96AA3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AL355834.1-201ENST00000556602 3965 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFT1Q96AA3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFT1Q96AA3 CUL4AP1-201ENST00000514750 1863 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC007342.9-201ENST00000623877 1385 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFT1Q96AA3 PSMC1P4-201ENST00000515236 1327 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFT1Q96AA3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFT1Q96AA3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 RNA5SP355-201ENST00000365317 135 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 LDHAP5-201ENST00000394996 622 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 AL096800.1-201ENST00000405326 893 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 AL451061.1-201ENST00000407887 862 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFT1Q96AA3 RPLP1P10-201ENST00000413972 339 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFT1Q96AA3 UBE2V1P14-201ENST00000415815 558 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFT1Q96AA3 RFESDP1-201ENST00000422350 461 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 SPATA20P1-201ENST00000423089 438 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AL592114.2-201ENST00000440142 532 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 RPL5P10-201ENST00000445207 894 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AL929410.2-201ENST00000451170 189 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 RBMY2EP-202ENST00000456360 940 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC105391.1-201ENST00000503155 1045 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 RPL7L1P7-201ENST00000509986 724 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC096661.1-201ENST00000515870 822 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC027026.1-201ENST00000532323 742 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 DIMT1P1-201ENST00000603970 763 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AC127071.2-201ENST00000623293 527 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 AL022311.1-201ENST00000623726 19416 ntBASIC5.58□□□□□ -1.52
RFT1Q96AA3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFT1Q96AA3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RFT1Q96AA3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFT1Q96AA3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFT1Q96AA3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms