Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.99□□□□□ -1.13
COL22A1Q8NFW1 AP000550.3-201ENST00000637734 379 ntBASIC7.99□□□□□ -1.13
COL22A1Q8NFW1 OR52B5P-202ENST00000641118 1110 ntBASIC7.99□□□□□ -1.13
COL22A1Q8NFW1 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL22A1Q8NFW1 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
COL22A1Q8NFW1 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.99□□□□□ -1.13
COL22A1Q8NFW1 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 AC105114.1-201ENST00000624795 1862 ntBASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 SRRM1P3-201ENST00000426911 2678 ntBASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 OR10R3P-201ENST00000361688 942 ntBASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 RNA5SP131-201ENST00000365452 119 ntBASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 RPS4XP1-201ENST00000482189 787 ntBASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 AC093890.1-201ENST00000502554 540 ntBASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 AC147055.3-201ENST00000510547 851 ntBASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 OR11H2-202ENST00000641517 1085 ntBASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 PARP4P2-201ENST00000446672 3326 ntBASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL22A1Q8NFW1 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 RN7SKP213-201ENST00000410746 298 ntBASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 RPL15P21-201ENST00000495592 567 ntBASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 HNRNPCP1-201ENST00000556181 766 ntBASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 TXNP4-201ENST00000575018 310 ntBASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 LRRC37A6P-202ENST00000448648 5444 ntBASIC7.97□□□□□ -1.13
COL22A1Q8NFW1 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 VDAC1P6-201ENST00000430062 855 ntBASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 HIGD1AP8-201ENST00000453927 274 ntBASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 EIF1P7-201ENST00000487533 337 ntBASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 RN7SKP66-201ENST00000516681 231 ntBASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 AC007842.1-201ENST00000597336 2039 ntBASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
COL22A1Q8NFW1 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
COL22A1Q8NFW1 LRRC37A17P-201ENST00000570311 4693 ntBASIC7.96□□□□□ -1.14
COL22A1Q8NFW1 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
COL22A1Q8NFW1 AC105235.1-201ENST00000623208 1816 ntBASIC7.96□□□□□ -1.14
COL22A1Q8NFW1 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
COL22A1Q8NFW1 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms