Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.57□□□□□ -1.52
H3F3AP84243 RPL34P33-201ENST00000486062 334 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.57□□□□□ -1.52
H3F3AP84243 RNA5SP400-201ENST00000517155 111 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.57□□□□□ -1.52
H3F3AP84243 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.57□□□□□ -1.52
H3F3AP84243 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.57□□□□□ -1.52
H3F3AP84243 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.57□□□□□ -1.52
H3F3AP84243 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.57□□□□□ -1.52
H3F3AP84243 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.57□□□□□ -1.52
H3F3AP84243 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.57□□□□□ -1.52
H3F3AP84243 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.57□□□□□ -1.52
H3F3AP84243 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 AL078601.3-201ENST00000573303 535 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 OR1E3-201ENST00000575608 948 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.57□□□□□ -1.52
H3F3AP84243 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.57□□□□□ -1.52
H3F3AP84243 AL359091.2-201ENST00000609303 556 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 AC111152.1-202ENST00000635848 339 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
H3F3AP84243 AC023632.6-201ENST00000624338 2177 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 AOX3P-204ENST00000491025 2107 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.57□□□□□ -1.52
H3F3AP84243 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
H3F3AP84243 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 HDAC1P2-201ENST00000453661 1398 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
H3F3AP84243 AL353763.1-201ENST00000624467 1628 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.56□□□□□ -1.52
H3F3AP84243 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.56□□□□□ -1.52
H3F3AP84243 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.56□□□□□ -1.52
H3F3AP84243 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
H3F3AP84243 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.56□□□□□ -1.52
H3F3AP84243 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
H3F3AP84243 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
H3F3AP84243 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
H3F3AP84243 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.56□□□□□ -1.52
H3F3AP84243 AL035422.1-201ENST00000414193 397 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.56□□□□□ -1.52
H3F3AP84243 IGLV3-4-201ENST00000432300 244 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 GAPDHP59-201ENST00000435908 267 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 PPP1R11P1-201ENST00000486095 376 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.56□□□□□ -1.52
H3F3AP84243 AC091874.2-201ENST00000505889 720 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.56□□□□□ -1.52
H3F3AP84243 SNX18P25-201ENST00000510539 758 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 AC090958.1-201ENST00000511122 351 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 RNA5SP434-201ENST00000516647 121 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.56□□□□□ -1.52
H3F3AP84243 OR4A40P-201ENST00000533878 948 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.56□□□□□ -1.52
H3F3AP84243 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.56□□□□□ -1.52
H3F3AP84243 OR4H6P-201ENST00000563771 921 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 AC093524.1-201ENST00000564266 1094 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 MIR4701-201ENST00000583094 63 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
H3F3AP84243 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.56□□□□□ -1.52
H3F3AP84243 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.56□□□□□ -1.52
H3F3AP84243 SMIM12P1-201ENST00000603004 274 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 AP001823.1-201ENST00000604056 1003 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.56□□□□□ -1.52
H3F3AP84243 MIR6889-201ENST00000613185 59 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 uc_338.31-201ENST00000615595 186 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 AL109924.4-201ENST00000623089 670 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 AC063952.1-203ENST00000634410 658 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.56□□□□□ -1.52
H3F3AP84243 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.56□□□□□ -1.52
H3F3AP84243 AC005225.5-201ENST00000623547 2225 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 AC011416.1-201ENST00000514947 1732 ntBASIC5.56□□□□□ -1.52
H3F3AP84243 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
H3F3AP84243 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
H3F3AP84243 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
H3F3AP84243 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3AP84243 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
H3F3AP84243 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3AP84243 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
H3F3AP84243 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3AP84243 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
H3F3AP84243 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3AP84243 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3AP84243 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3AP84243 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3AP84243 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.55□□□□□ -1.52
H3F3AP84243 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms