Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
HOXA6P31267 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA6P31267 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA6P31267 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA6P31267 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
HOXA6P31267 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA6P31267 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXA6P31267 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXA6P31267 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA6P31267 MTND4LP17-201ENST00000414607 293 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXA6P31267 AC245884.2-201ENST00000426257 404 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXA6P31267 NDUFS5P5-201ENST00000437256 321 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 AC064862.4-201ENST00000442180 334 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 AL355355.1-201ENST00000442900 793 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA6P31267 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXA6P31267 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXA6P31267 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXA6P31267 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXA6P31267 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.27□□□□□ -1.41
HOXA6P31267 IGHV3-57-201ENST00000520143 280 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXA6P31267 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXA6P31267 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXA6P31267 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXA6P31267 AP001858.2-201ENST00000536213 601 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXA6P31267 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXA6P31267 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXA6P31267 ZNF322P1-201ENST00000568013 1209 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 SNORD95-201ENST00000579879 68 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 RFPL4AP6-201ENST00000616792 846 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 MIR7159-201ENST00000620587 66 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXA6P31267 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXA6P31267 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXA6P31267 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXA6P31267 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
HOXA6P31267 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA6P31267 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 MAPK10-365ENST00000641902 3825 ntBASIC6.27□□□□□ -1.41
HOXA6P31267 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA6P31267 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXA6P31267 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.26□□□□□ -1.41
HOXA6P31267 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA6P31267 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA6P31267 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HOXA6P31267 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA6P31267 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA6P31267 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HOXA6P31267 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA6P31267 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA6P31267 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA6P31267 AL133243.2-201ENST00000610331 1621 ntBASIC6.26□□□□□ -1.41
HOXA6P31267 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXA6P31267 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HOXA6P31267 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA6P31267 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA6P31267 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA6P31267 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA6P31267 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXA6P31267 RNU1-49P-201ENST00000363468 159 ntBASIC6.26□□□□□ -1.41
HOXA6P31267 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA6P31267 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXA6P31267 RNA5SP156-201ENST00000410250 110 ntBASIC6.26□□□□□ -1.41
HOXA6P31267 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA6P31267 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA6P31267 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA6P31267 AL512605.1-202ENST00000441919 381 ntBASIC6.26□□□□□ -1.41
HOXA6P31267 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA6P31267 AL359955.2-201ENST00000445380 353 ntBASIC6.26□□□□□ -1.41
HOXA6P31267 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA6P31267 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA6P31267 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA6P31267 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.26□□□□□ -1.41
HOXA6P31267 SETP4-201ENST00000455717 868 ntBASIC6.26□□□□□ -1.41
HOXA6P31267 AC110749.1-201ENST00000462007 357 ntBASIC6.26□□□□□ -1.41
HOXA6P31267 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA6P31267 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA6P31267 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA6P31267 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA6P31267 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA6P31267 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA6P31267 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA6P31267 AL513218.1-201ENST00000606527 391 ntBASIC6.26□□□□□ -1.41
HOXA6P31267 AL136131.3-201ENST00000607600 188 ntBASIC6.26□□□□□ -1.41
HOXA6P31267 MIR6809-201ENST00000612189 116 ntBASIC6.26□□□□□ -1.41
HOXA6P31267 RN7SL787P-201ENST00000613000 284 ntBASIC6.26□□□□□ -1.41
HOXA6P31267 AC004477.3-201ENST00000614061 590 ntBASIC6.26□□□□□ -1.41
HOXA6P31267 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA6P31267 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA6P31267 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA6P31267 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA6P31267 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA6P31267 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA6P31267 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA6P31267 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA6P31267 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms