Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
COL11A1P12107 RN7SKP278-201ENST00000410504 342 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 SEPT14P12-201ENST00000442280 560 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 AC026254.2-201ENST00000475295 371 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 AP004607.6-201ENST00000525033 1202 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.85□□□□□ -1.31
COL11A1P12107 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.85□□□□□ -1.31
COL11A1P12107 AC073916.1-201ENST00000545095 130 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.85□□□□□ -1.31
COL11A1P12107 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.85□□□□□ -1.31
COL11A1P12107 AC005229.3-201ENST00000603438 323 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 AL021707.7-201ENST00000607991 416 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 OR11H2-202ENST00000641517 1085 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COL11A1P12107 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
COL11A1P12107 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.84□□□□□ -1.31
COL11A1P12107 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL11A1P12107 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
COL11A1P12107 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL11A1P12107 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL11A1P12107 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL11A1P12107 AL391261.1-201ENST00000555712 1479 ntBASIC6.84□□□□□ -1.31
COL11A1P12107 FO393409.1-201ENST00000399325 1372 ntBASIC6.84□□□□□ -1.31
COL11A1P12107 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
COL11A1P12107 FAM32BP-201ENST00000344033 333 ntBASIC6.84□□□□□ -1.31
COL11A1P12107 MIR1178-201ENST00000408396 91 ntBASIC6.84□□□□□ -1.31
COL11A1P12107 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.84□□□□□ -1.31
COL11A1P12107 RPS12P17-201ENST00000438591 377 ntBASIC6.84□□□□□ -1.31
COL11A1P12107 OR13K1P-201ENST00000444577 975 ntBASIC6.84□□□□□ -1.31
COL11A1P12107 SUMO2P1-206ENST00000445436 284 ntBASIC6.84□□□□□ -1.31
COL11A1P12107 AL022319.1-201ENST00000458183 1167 ntBASIC6.84□□□□□ -1.31
COL11A1P12107 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.84□□□□□ -1.31
COL11A1P12107 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.84□□□□□ -1.31
COL11A1P12107 IGKV2-19-201ENST00000518132 283 ntBASIC6.84□□□□□ -1.31
COL11A1P12107 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.84□□□□□ -1.31
COL11A1P12107 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.84□□□□□ -1.31
COL11A1P12107 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.84□□□□□ -1.31
COL11A1P12107 AC011497.2-201ENST00000600255 639 ntBASIC6.84□□□□□ -1.31
COL11A1P12107 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.84□□□□□ -1.31
COL11A1P12107 AC127024.6-201ENST00000621598 424 ntBASIC6.84□□□□□ -1.31
COL11A1P12107 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.31
COL11A1P12107 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.84□□□□□ -1.31
COL11A1P12107 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL11A1P12107 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL11A1P12107 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL11A1P12107 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL11A1P12107 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL11A1P12107 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
COL11A1P12107 AOX3P-204ENST00000491025 2107 ntBASIC6.84□□□□□ -1.31
COL11A1P12107 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
COL11A1P12107 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
COL11A1P12107 MAPK10-261ENST00000641050 3109 ntBASIC6.84□□□□□ -1.32
COL11A1P12107 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.84□□□□□ -1.32
COL11A1P12107 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.83□□□□□ -1.32
COL11A1P12107 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
COL11A1P12107 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL11A1P12107 OR3A2-201ENST00000408891 1076 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 RN7SKP293-201ENST00000411389 296 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.83□□□□□ -1.32
COL11A1P12107 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.83□□□□□ -1.32
COL11A1P12107 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.83□□□□□ -1.32
COL11A1P12107 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 OR7E158P-201ENST00000524483 910 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 AC016180.1-201ENST00000567945 403 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 AC005244.1-201ENST00000582566 339 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.83□□□□□ -1.32
COL11A1P12107 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.83□□□□□ -1.32
COL11A1P12107 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC6.83□□□□□ -1.32
COL11A1P12107 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.83□□□□□ -1.32
COL11A1P12107 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 WDR95P-201ENST00000425638 1542 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
COL11A1P12107 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.83□□□□□ -1.32
COL11A1P12107 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COL11A1P12107 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.83□□□□□ -1.32
COL11A1P12107 AL391422.1-201ENST00000402155 436 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 AC016739.1-201ENST00000405359 345 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 DPPA2P3-201ENST00000411853 655 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 SDHDP6-201ENST00000414693 480 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 AL513325.1-201ENST00000417716 1034 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.83□□□□□ -1.32
COL11A1P12107 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.83□□□□□ -1.32
COL11A1P12107 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.83□□□□□ -1.32
COL11A1P12107 AL022237.1-201ENST00000446663 358 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.83□□□□□ -1.32
COL11A1P12107 AC103563.5-201ENST00000455643 364 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 RPS3AP15-201ENST00000483874 781 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 RPL32P33-201ENST00000487023 394 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.83□□□□□ -1.32
COL11A1P12107 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.83□□□□□ -1.32
COL11A1P12107 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms