Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RN7SL104P-201ENST00000498686 293 ntBASIC6.55□□□□□ -1.36
APOEP02649 AC122718.2-201ENST00000505325 591 ntBASIC6.55□□□□□ -1.36
APOEP02649 AC112484.3-201ENST00000505910 329 ntBASIC6.55□□□□□ -1.36
APOEP02649 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.55□□□□□ -1.36
APOEP02649 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.55□□□□□ -1.36
APOEP02649 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.55□□□□□ -1.36
APOEP02649 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.55□□□□□ -1.36
APOEP02649 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.55□□□□□ -1.36
APOEP02649 AC024589.2-201ENST00000605642 1294 ntBASIC6.55□□□□□ -1.36
APOEP02649 AL352984.2-202ENST00000613699 155 ntBASIC6.55□□□□□ -1.36
APOEP02649 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.55□□□□□ -1.36
APOEP02649 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 MIR6806-201ENST00000622141 64 ntBASIC6.55□□□□□ -1.36
APOEP02649 CASC19-274ENST00000642018 970 ntBASIC6.55□□□□□ -1.36
APOEP02649 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
APOEP02649 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.55□□□□□ -1.36
APOEP02649 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.55□□□□□ -1.36
APOEP02649 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
APOEP02649 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
APOEP02649 AC083837.1-201ENST00000565297 2994 ntBASIC6.54□□□□□ -1.36
APOEP02649 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
APOEP02649 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
APOEP02649 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
APOEP02649 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
APOEP02649 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
APOEP02649 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
APOEP02649 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
APOEP02649 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.54□□□□□ -1.36
APOEP02649 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.54□□□□□ -1.36
APOEP02649 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
APOEP02649 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
APOEP02649 RBBP4P5-201ENST00000398583 1266 ntBASIC6.54□□□□□ -1.36
APOEP02649 YWHAZP6-201ENST00000399764 738 ntBASIC6.54□□□□□ -1.36
APOEP02649 RN7SKP144-201ENST00000411108 279 ntBASIC6.54□□□□□ -1.36
APOEP02649 TMA16P2-201ENST00000413187 601 ntBASIC6.54□□□□□ -1.36
APOEP02649 RPL23AP18-201ENST00000416139 468 ntBASIC6.54□□□□□ -1.36
APOEP02649 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.54□□□□□ -1.36
APOEP02649 IGLV3-4-201ENST00000432300 244 ntBASIC6.54□□□□□ -1.36
APOEP02649 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.54□□□□□ -1.36
APOEP02649 AC118758.1-202ENST00000454719 225 ntBASIC6.54□□□□□ -1.36
APOEP02649 RN7SL741P-201ENST00000482473 289 ntBASIC6.54□□□□□ -1.36
APOEP02649 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
APOEP02649 ZNF519P4-201ENST00000514008 125 ntBASIC6.54□□□□□ -1.36
APOEP02649 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
APOEP02649 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.54□□□□□ -1.36
APOEP02649 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.54□□□□□ -1.36
APOEP02649 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.54□□□□□ -1.36
APOEP02649 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
APOEP02649 AC233699.1-201ENST00000569955 1168 ntBASIC6.54□□□□□ -1.36
APOEP02649 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
APOEP02649 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.54□□□□□ -1.36
APOEP02649 SMIM12P1-201ENST00000603004 274 ntBASIC6.54□□□□□ -1.36
APOEP02649 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.54□□□□□ -1.36
APOEP02649 AC024255.1-201ENST00000614376 102 ntBASIC6.54□□□□□ -1.36
APOEP02649 uc_338.31-201ENST00000615595 186 ntBASIC6.54□□□□□ -1.36
APOEP02649 AL445649.1-201ENST00000615941 691 ntBASIC6.54□□□□□ -1.36
APOEP02649 AL157762.1-201ENST00000619612 415 ntBASIC6.54□□□□□ -1.36
APOEP02649 AL109924.4-201ENST00000623089 670 ntBASIC6.54□□□□□ -1.36
APOEP02649 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
APOEP02649 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
APOEP02649 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.54□□□□□ -1.36
APOEP02649 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
APOEP02649 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
APOEP02649 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
APOEP02649 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
APOEP02649 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC6.53□□□□□ -1.36
APOEP02649 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.53□□□□□ -1.36
APOEP02649 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.53□□□□□ -1.36
APOEP02649 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.53□□□□□ -1.36
APOEP02649 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
APOEP02649 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
APOEP02649 HSPD1P8-201ENST00000400121 1658 ntBASIC6.53□□□□□ -1.36
APOEP02649 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
APOEP02649 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
APOEP02649 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
APOEP02649 OR11H13P-201ENST00000359695 979 ntBASIC6.53□□□□□ -1.36
APOEP02649 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.53□□□□□ -1.36
APOEP02649 AC092865.3-201ENST00000425390 1026 ntBASIC6.53□□□□□ -1.36
APOEP02649 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.53□□□□□ -1.36
APOEP02649 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
APOEP02649 GAPDHP59-201ENST00000435908 267 ntBASIC6.53□□□□□ -1.36
APOEP02649 AC093166.3-201ENST00000448785 303 ntBASIC6.53□□□□□ -1.36
APOEP02649 AL133351.3-201ENST00000454998 193 ntBASIC6.53□□□□□ -1.36
APOEP02649 RN7SL254P-201ENST00000460609 284 ntBASIC6.53□□□□□ -1.36
APOEP02649 AP002453.1-201ENST00000492327 668 ntBASIC6.53□□□□□ -1.36
APOEP02649 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.53□□□□□ -1.36
APOEP02649 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.53□□□□□ -1.36
APOEP02649 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.53□□□□□ -1.36
APOEP02649 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.53□□□□□ -1.36
APOEP02649 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.53□□□□□ -1.36
APOEP02649 AL031658.2-201ENST00000616850 651 ntBASIC6.53□□□□□ -1.36
APOEP02649 MIR6721-201ENST00000617181 87 ntBASIC6.53□□□□□ -1.36
APOEP02649 AC111152.1-202ENST00000635848 339 ntBASIC6.53□□□□□ -1.36
APOEP02649 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms