Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
ALDH1A1P00352 TTC3P1-201ENST00000399586 6081 ntBASIC8.66□□□□□ -1.02
ALDH1A1P00352 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ALDH1A1P00352 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ALDH1A1P00352 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ALDH1A1P00352 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC8.66□□□□□ -1.02
ALDH1A1P00352 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ALDH1A1P00352 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC8.66□□□□□ -1.02
ALDH1A1P00352 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC8.66□□□□□ -1.02
ALDH1A1P00352 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.66□□□□□ -1.02
ALDH1A1P00352 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.66□□□□□ -1.02
ALDH1A1P00352 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
ALDH1A1P00352 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC8.66□□□□□ -1.02
ALDH1A1P00352 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC8.66□□□□□ -1.02
ALDH1A1P00352 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
ALDH1A1P00352 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 MIR187-201ENST00000385062 109 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 RPL17P50-201ENST00000396131 546 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 AL136100.1-201ENST00000407696 330 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC008173.1-201ENST00000418901 264 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 RPL12P43-201ENST00000420608 499 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 GTF2IP2-201ENST00000424290 697 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 USP9YP9-201ENST00000429406 715 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC093155.1-201ENST00000440164 826 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 Z99127.2-201ENST00000441426 334 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 GTF3AP5-201ENST00000442645 697 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 MRPL35P2-201ENST00000448009 511 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 NFU1P2-201ENST00000448700 469 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 AL445991.1-201ENST00000450381 475 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 RPL7P1-201ENST00000468161 747 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 RPL7P9-201ENST00000468715 747 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 B4GALNT2P1-201ENST00000508857 307 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC233724.10-201ENST00000510454 409 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 SERPINA15P-201ENST00000529287 266 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC244034.2-201ENST00000562504 509 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC027281.1-201ENST00000574178 758 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 OR7D1P-201ENST00000592739 933 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 RPS27AP19-201ENST00000597285 458 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 AC069499.2-201ENST00000610665 382 ntBASIC8.65□□□□□ -1.02
ALDH1A1P00352 VPS8-228ENST00000628962 207 ntTSL 5 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
ALDH1A1P00352 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
ALDH1A1P00352 CARF-201ENST00000320443 5209 ntTSL 2 BASIC8.65□□□□□ -1.03
ALDH1A1P00352 AL161891.1-201ENST00000621575 4636 ntBASIC8.65□□□□□ -1.03
ALDH1A1P00352 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
ALDH1A1P00352 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC8.65□□□□□ -1.03
ALDH1A1P00352 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC8.65□□□□□ -1.03
ALDH1A1P00352 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
ALDH1A1P00352 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
ALDH1A1P00352 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
ALDH1A1P00352 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ALDH1A1P00352 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC8.64□□□□□ -1.03
ALDH1A1P00352 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC8.64□□□□□ -1.03
ALDH1A1P00352 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ALDH1A1P00352 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ALDH1A1P00352 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ALDH1A1P00352 AL356317.1-201ENST00000396110 1436 ntBASIC8.64□□□□□ -1.03
ALDH1A1P00352 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC8.64□□□□□ -1.03
ALDH1A1P00352 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC8.64□□□□□ -1.03
ALDH1A1P00352 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.64□□□□□ -1.03
ALDH1A1P00352 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
ALDH1A1P00352 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ALDH1A1P00352 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
ALDH1A1P00352 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ALDH1A1P00352 RNFT1P3-201ENST00000340898 1052 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms