Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
PCDHGA11Q9Y5H2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PCDHGA11Q9Y5H2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PCDHGA11Q9Y5H2 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AL133279.3-201ENST00000563140 2352 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 TTTY25P-201ENST00000558356 1505 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 CASC19-243ENST00000641588 1546 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 RNU4-76P-201ENST00000364509 141 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 Y_RNA.302-201ENST00000364997 102 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 Y_RNA.408-201ENST00000383987 102 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AL050335.1-201ENST00000396909 869 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AL034403.1-201ENST00000399414 885 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 TDGF1P4-201ENST00000401555 520 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 RN7SKP285-201ENST00000410137 318 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 RNA5SP265-201ENST00000411023 111 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC013404.1-201ENST00000413068 249 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 NONOP2-201ENST00000414613 1231 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 PTP4A1P1-201ENST00000420539 515 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 SEPT7P5-201ENST00000434048 306 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 RPS28P8-201ENST00000435020 208 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 RPS25P9-201ENST00000435591 252 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC091808.1-201ENST00000438867 786 ntTSL 3 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 ACTP1-201ENST00000440793 383 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AL662791.1-201ENST00000441992 928 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 PSMA2-204ENST00000445517 683 ntTSL 2 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 ELOBP1-201ENST00000447693 357 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 PCMTD1P3-201ENST00000451824 472 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 BZW1P1-201ENST00000454901 1240 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 FAM92A1P2-202ENST00000504766 877 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC108073.1-201ENST00000508231 674 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 RNU6-1225P-201ENST00000516336 65 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC135983.3-201ENST00000528049 1226 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 NPIPP1-203ENST00000547107 1071 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 PCMTD1P2-201ENST00000565017 355 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 PPIAP14-201ENST00000577627 496 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 BNIP3P4-201ENST00000604946 565 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC084876.1-201ENST00000612793 641 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 Y_RNA.804-201ENST00000615262 101 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC012150.2-201ENST00000621300 544 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 DUXAP9-208ENST00000622815 614 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC012254.5-201ENST00000623573 478 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 GUCY2GP-201ENST00000479705 3222 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 ZNF887P-201ENST00000431363 1407 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AL354685.2-201ENST00000448218 1447 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AC245505.2-201ENST00000553572 3055 ntBASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PCDHGA11Q9Y5H2 AL391261.1-201ENST00000555712 1479 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms