Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 AC098847.1-201ENST00000473094 348 ntBASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 AC105749.1-201ENST00000631338 2008 ntBASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 MAPK10-371ENST00000641952 5209 ntBASIC5.52□□□□□ -1.53
KIAA1549Q9HCM3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC010329.1-201ENST00000593903 8328 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 KARSP1-201ENST00000451871 1752 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 RBMY1HP-201ENST00000382759 1389 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 COX6B1P3-201ENST00000312310 260 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 RNA5SP350-201ENST00000363298 111 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 RNA5SP478-201ENST00000364657 115 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC023818.1-201ENST00000498379 384 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC021269.1-201ENST00000526860 705 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AL445649.1-201ENST00000615941 691 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 SNORA70H-201ENST00000383910 135 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 SNORA70J-201ENST00000384182 135 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 RNU11-6P-201ENST00000391127 133 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AL031985.1-201ENST00000392713 418 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC015977.1-201ENST00000418887 292 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC124945.1-201ENST00000485133 188 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 RPL17P2-201ENST00000491913 451 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC012146.2-201ENST00000576545 416 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AL136228.1-201ENST00000622221 319 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 AC087269.2-201ENST00000641764 975 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 GUCY1B2-204ENST00000531898 1979 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 CASC19-243ENST00000641588 1546 ntBASIC5.51□□□□□ -1.53
KIAA1549Q9HCM3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AC024587.1-201ENST00000505925 2157 ntBASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms