Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 RN7SKP213-201ENST00000410746 298 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AL022331.1-201ENST00000429025 477 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 DEFA11P-201ENST00000446470 261 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 HIGD1AP8-201ENST00000453927 274 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AC096996.1-201ENST00000563813 325 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AC096861.1-201ENST00000616652 240 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AP002505.2-201ENST00000623585 696 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 FBXL21-201ENST00000297158 1305 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AL669831.5-218ENST00000591702 1873 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 MIR1286-201ENST00000408112 78 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AL645937.3-201ENST00000453647 936 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 HIGD1AP14-201ENST00000507617 282 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 CDH12P4-201ENST00000517835 295 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 CDH12P3-201ENST00000517935 295 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 CDH12P1-201ENST00000518435 295 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 HIGD1AP5-201ENST00000529959 259 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AL359513.1-201ENST00000614364 557 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 CC2D2A-202ENST00000424120 5249 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AC005332.9-201ENST00000620266 2921 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AK4P4-201ENST00000419465 646 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 BX510359.5-201ENST00000515651 304 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 AC136428.4-201ENST00000634254 1155 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 MFSD8-216ENST00000641147 4009 ntBASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ALMS1Q8TCU4 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 RNA5SP333-201ENST00000363466 118 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 RNA5SP334-201ENST00000364825 118 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms