Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AL353743.3-201ENST00000442109 1468 ntBASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AL157702.1-201ENST00000398764 426 ntBASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 TMA16P2-201ENST00000413187 601 ntBASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AL139415.1-201ENST00000424862 352 ntBASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 BX679664.2-201ENST00000439282 283 ntBASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AL645936.1-201ENST00000441979 518 ntBASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AC092824.1-201ENST00000483524 576 ntBASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 RNA5SP206-201ENST00000516703 121 ntBASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 GLYATL1P2-202ENST00000588046 902 ntBASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 SNORA74.4-201ENST00000607595 199 ntBASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AC012653.2-201ENST00000621880 420 ntBASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC104966.1-201ENST00000467010 1464 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AL161901.1-201ENST00000624954 3425 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC125238.2-201ENST00000430003 1440 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 SNORD16-201ENST00000362803 99 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 RNU1-59P-201ENST00000364829 162 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 RPS17P17-201ENST00000419392 409 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AL157884.1-201ENST00000424561 454 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC021876.1-201ENST00000425959 359 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC097721.1-201ENST00000427150 1253 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AL354707.3-201ENST00000427308 331 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 RPSAP65-201ENST00000429660 595 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC079807.1-201ENST00000429993 481 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AMYP1-201ENST00000440059 1023 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 HMGN1P2-201ENST00000445197 310 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 SNX18P24-201ENST00000505249 671 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 IGHV3-57-201ENST00000520143 280 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 RN7SL475P-201ENST00000583379 298 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC091167.5-201ENST00000605689 894 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 U1.25-201ENST00000614085 162 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 U1.34-201ENST00000618578 162 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 U1.31-201ENST00000620022 160 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AL359742.1-201ENST00000622497 540 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 AC073488.6-201ENST00000632293 754 ntBASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
CLDND2Q8NHS1 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms