Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN20P56880 LDHAP2-201ENST00000437325 985 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 ARMC4P1-201ENST00000438905 707 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN20P56880 AC017099.1-201ENST00000448261 1028 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN20P56880 MTND2P3-201ENST00000452458 470 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.87□□□□□ -1.47
CLDN20P56880 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN20P56880 RPL29P23-201ENST00000486188 442 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.87□□□□□ -1.47
CLDN20P56880 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN20P56880 AP005639.1-201ENST00000526939 192 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 TDGP1-201ENST00000543961 1229 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN20P56880 AC063977.7-201ENST00000594454 337 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 AC007620.3-201ENST00000608131 497 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 AP001264.1-201ENST00000620602 703 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.87□□□□□ -1.47
CLDN20P56880 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.87□□□□□ -1.47
CLDN20P56880 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN20P56880 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.87□□□□□ -1.47
CLDN20P56880 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
CLDN20P56880 AC119674.1-213ENST00000641177 1386 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN20P56880 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.87□□□□□ -1.47
CLDN20P56880 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN20P56880 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN20P56880 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.87□□□□□ -1.47
CLDN20P56880 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN20P56880 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN20P56880 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.86□□□□□ -1.47
CLDN20P56880 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.86□□□□□ -1.47
CLDN20P56880 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.86□□□□□ -1.47
CLDN20P56880 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN20P56880 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN20P56880 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN20P56880 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.86□□□□□ -1.47
CLDN20P56880 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN20P56880 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.86□□□□□ -1.47
CLDN20P56880 AC083862.1-201ENST00000427378 1242 ntBASIC5.86□□□□□ -1.47
CLDN20P56880 TRIM60P13-201ENST00000432350 1283 ntBASIC5.86□□□□□ -1.47
CLDN20P56880 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.86□□□□□ -1.47
CLDN20P56880 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.86□□□□□ -1.47
CLDN20P56880 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.86□□□□□ -1.47
CLDN20P56880 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.86□□□□□ -1.47
CLDN20P56880 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.86□□□□□ -1.47
CLDN20P56880 AC098818.1-201ENST00000478593 252 ntBASIC5.86□□□□□ -1.47
CLDN20P56880 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.86□□□□□ -1.47
CLDN20P56880 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.86□□□□□ -1.47
CLDN20P56880 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.86□□□□□ -1.47
CLDN20P56880 AC018645.1-201ENST00000505003 109 ntBASIC5.86□□□□□ -1.47
CLDN20P56880 GUSBP9-201ENST00000510138 584 ntBASIC5.86□□□□□ -1.47
CLDN20P56880 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.86□□□□□ -1.47
CLDN20P56880 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.86□□□□□ -1.47
CLDN20P56880 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.86□□□□□ -1.47
CLDN20P56880 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.86□□□□□ -1.47
CLDN20P56880 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.86□□□□□ -1.47
CLDN20P56880 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.86□□□□□ -1.47
CLDN20P56880 RPL3P13-201ENST00000550415 216 ntBASIC5.86□□□□□ -1.47
CLDN20P56880 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN20P56880 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.86□□□□□ -1.47
CLDN20P56880 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN20P56880 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.86□□□□□ -1.47
CLDN20P56880 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CLDN20P56880 AL589765.6-201ENST00000601909 549 ntBASIC5.86□□□□□ -1.47
CLDN20P56880 WBP1LP12-201ENST00000604449 331 ntBASIC5.86□□□□□ -1.47
CLDN20P56880 AC025171.4-201ENST00000607250 1047 ntBASIC5.86□□□□□ -1.47
CLDN20P56880 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.86□□□□□ -1.47
CLDN20P56880 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CLDN20P56880 AL162377.2-201ENST00000624532 337 ntBASIC5.86□□□□□ -1.47
CLDN20P56880 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.86□□□□□ -1.47
CLDN20P56880 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
CLDN20P56880 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN20P56880 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN20P56880 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.86□□□□□ -1.47
CLDN20P56880 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN20P56880 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CLDN20P56880 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.86□□□□□ -1.47
CLDN20P56880 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN20P56880 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN20P56880 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN20P56880 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN20P56880 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 MSL3P1-202ENST00000440028 1468 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN20P56880 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN20P56880 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN20P56880 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLDN20P56880 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN20P56880 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms