Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC107952.1-201ENST00000524200 376 ntBASIC5.34□□□□□ -1.55
HLA-DMAP28067 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DMAP28067 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 AC091133.5-201ENST00000603088 301 ntBASIC5.34□□□□□ -1.55
HLA-DMAP28067 PRR13P3-201ENST00000603578 376 ntBASIC5.34□□□□□ -1.55
HLA-DMAP28067 AC006363.1-201ENST00000603806 463 ntBASIC5.34□□□□□ -1.55
HLA-DMAP28067 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 AC005753.1-201ENST00000623837 618 ntBASIC5.34□□□□□ -1.55
HLA-DMAP28067 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DMAP28067 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DMAP28067 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DMAP28067 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.56
HLA-DMAP28067 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HLA-DMAP28067 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HLA-DMAP28067 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HLA-DMAP28067 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HLA-DMAP28067 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DMAP28067 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AC007842.1-201ENST00000597336 2039 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DMAP28067 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AC005261.6-201ENST00000623072 1387 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DMAP28067 MIR99A-201ENST00000384906 81 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 LDHAP5-201ENST00000394996 622 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 RPSAP44-201ENST00000406712 884 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 RPS10P18-201ENST00000442662 495 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 CYCSP51-201ENST00000443545 318 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 OR9A1P-202ENST00000484361 945 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 COX6B1P4-201ENST00000519826 484 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AL132640.2-202ENST00000559732 614 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 MIR5682-201ENST00000584864 76 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 NPIPB1P-202ENST00000588786 828 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 DIMT1P1-201ENST00000603970 763 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AC097063.1-201ENST00000426714 1797 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DMAP28067 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DMAP28067 CDY11P-201ENST00000447168 1651 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AC003985.2-201ENST00000562268 1669 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DMAP28067 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DMAP28067 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DMAP28067 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 AC092376.2-201ENST00000622621 4116 ntBASIC5.33□□□□□ -1.56
HLA-DMAP28067 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DMAP28067 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DMAP28067 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DMAP28067 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DMAP28067 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HLA-DMAP28067 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HLA-DMAP28067 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.32□□□□□ -1.56
HLA-DMAP28067 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.32□□□□□ -1.56
HLA-DMAP28067 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
HLA-DMAP28067 AC239868.2-201ENST00000564237 4527 ntBASIC5.32□□□□□ -1.56
HLA-DMAP28067 AC015689.2-201ENST00000528172 1738 ntBASIC5.32□□□□□ -1.56
HLA-DMAP28067 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DMAP28067 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DMAP28067 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms