Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 PDCL3P1-201ENST00000534575 734 ntBASIC10.93□□□□□ -0.66
CHGAP10645 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC10.93□□□□□ -0.66
CHGAP10645 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
CHGAP10645 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC10.93□□□□□ -0.66
CHGAP10645 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC10.93□□□□□ -0.66
CHGAP10645 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC10.93□□□□□ -0.66
CHGAP10645 AC126323.4-201ENST00000566935 234 ntBASIC10.93□□□□□ -0.66
CHGAP10645 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC10.93□□□□□ -0.66
CHGAP10645 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC10.93□□□□□ -0.66
CHGAP10645 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC10.93□□□□□ -0.66
CHGAP10645 AC078795.3-201ENST00000602913 472 ntBASIC10.93□□□□□ -0.66
CHGAP10645 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC10.93□□□□□ -0.66
CHGAP10645 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC10.93□□□□□ -0.66
CHGAP10645 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC10.93□□□□□ -0.66
CHGAP10645 AC006453.3-201ENST00000635891 377 ntBASIC10.93□□□□□ -0.66
CHGAP10645 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
CHGAP10645 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC10.93□□□□□ -0.66
CHGAP10645 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 AC016251.1-201ENST00000624299 4198 ntBASIC10.93□□□□□ -0.66
CHGAP10645 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC10.93□□□□□ -0.66
CHGAP10645 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CHGAP10645 CTAGE3P-201ENST00000454280 2404 ntBASIC10.93□□□□□ -0.66
CHGAP10645 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC10.93□□□□□ -0.66
CHGAP10645 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC10.93□□□□□ -0.66
CHGAP10645 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 AC020904.2-202ENST00000614660 1401 ntBASIC10.92□□□□□ -0.66
CHGAP10645 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC10.92□□□□□ -0.66
CHGAP10645 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 EIF3EP1-201ENST00000433978 1316 ntBASIC10.92□□□□□ -0.66
CHGAP10645 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CHGAP10645 FSHR-201ENST00000304421 2176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CHGAP10645 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC10.92□□□□□ -0.66
CHGAP10645 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
CHGAP10645 RPS7-204ENST00000407445 833 ntTSL 2 BASIC10.92□□□□□ -0.66
CHGAP10645 RPS15AP38-201ENST00000413110 372 ntBASIC10.92□□□□□ -0.66
CHGAP10645 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC10.92□□□□□ -0.66
CHGAP10645 AC092042.2-201ENST00000417304 331 ntBASIC10.92□□□□□ -0.66
CHGAP10645 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC10.92□□□□□ -0.66
CHGAP10645 USP9YP31-201ENST00000431405 881 ntBASIC10.92□□□□□ -0.66
CHGAP10645 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC10.92□□□□□ -0.66
CHGAP10645 AL353754.1-201ENST00000440219 340 ntBASIC10.92□□□□□ -0.66
CHGAP10645 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC10.92□□□□□ -0.66
CHGAP10645 RPL5P10-201ENST00000445207 894 ntBASIC10.92□□□□□ -0.66
CHGAP10645 MTND5P20-201ENST00000448677 143 ntBASIC10.92□□□□□ -0.66
CHGAP10645 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC10.92□□□□□ -0.66
CHGAP10645 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC10.92□□□□□ -0.66
CHGAP10645 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC10.92□□□□□ -0.66
CHGAP10645 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC10.92□□□□□ -0.66
CHGAP10645 RNU7-140P-201ENST00000459546 60 ntBASIC10.92□□□□□ -0.66
CHGAP10645 OR11I1P-201ENST00000486033 954 ntBASIC10.92□□□□□ -0.66
CHGAP10645 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC10.92□□□□□ -0.66
CHGAP10645 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC10.92□□□□□ -0.66
CHGAP10645 WBP1LP4-201ENST00000505043 344 ntBASIC10.92□□□□□ -0.66
CHGAP10645 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC10.92□□□□□ -0.66
CHGAP10645 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC10.92□□□□□ -0.66
CHGAP10645 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC10.92□□□□□ -0.66
CHGAP10645 AP006587.5-201ENST00000532033 739 ntBASIC10.92□□□□□ -0.66
CHGAP10645 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC10.92□□□□□ -0.66
CHGAP10645 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC10.92□□□□□ -0.66
CHGAP10645 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC10.92□□□□□ -0.66
CHGAP10645 EIF1P6-201ENST00000600054 334 ntBASIC10.92□□□□□ -0.66
CHGAP10645 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
CHGAP10645 AC069545.1-201ENST00000605671 358 ntBASIC10.92□□□□□ -0.66
CHGAP10645 AC008945.2-201ENST00000606056 604 ntBASIC10.92□□□□□ -0.66
CHGAP10645 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC10.92□□□□□ -0.66
CHGAP10645 AC090970.3-201ENST00000612566 866 ntBASIC10.92□□□□□ -0.66
CHGAP10645 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC10.92□□□□□ -0.66
CHGAP10645 AC072046.2-201ENST00000618366 268 ntBASIC10.92□□□□□ -0.66
CHGAP10645 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CHGAP10645 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
CHGAP10645 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CHGAP10645 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CHGAP10645 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 AC025822.2-201ENST00000455199 2287 ntTSL 2 BASIC10.92□□□□□ -0.66
CHGAP10645 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 TRIM53BP-201ENST00000532912 1720 ntBASIC10.92□□□□□ -0.66
CHGAP10645 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC10.92□□□□□ -0.66
CHGAP10645 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC10.92□□□□□ -0.66
CHGAP10645 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CHGAP10645 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CHGAP10645 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CHGAP10645 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC10.91□□□□□ -0.66
CHGAP10645 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 AL512353.3-201ENST00000417517 1326 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms