Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 Y_RNA.419-201ENST00000384041 102 ntBASIC8.85□□□□□ -0.99
RNF40O75150 SNORA14B-201ENST00000384452 135 ntBASIC8.85□□□□□ -0.99
RNF40O75150 IGLV1-51-201ENST00000390290 389 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
RNF40O75150 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
RNF40O75150 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC8.85□□□□□ -0.99
RNF40O75150 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC8.85□□□□□ -0.99
RNF40O75150 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC8.85□□□□□ -0.99
RNF40O75150 AC007742.1-201ENST00000425789 329 ntBASIC8.85□□□□□ -0.99
RNF40O75150 SAR1AP4-201ENST00000429225 591 ntBASIC8.85□□□□□ -0.99
RNF40O75150 RPL31P54-201ENST00000429803 370 ntBASIC8.85□□□□□ -0.99
RNF40O75150 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC8.85□□□□□ -0.99
RNF40O75150 ELOCP26-201ENST00000436067 329 ntBASIC8.85□□□□□ -0.99
RNF40O75150 AL590609.1-201ENST00000442164 328 ntBASIC8.85□□□□□ -0.99
RNF40O75150 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC8.85□□□□□ -0.99
RNF40O75150 RN7SL505P-201ENST00000482644 293 ntBASIC8.85□□□□□ -0.99
RNF40O75150 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC8.85□□□□□ -0.99
RNF40O75150 HSD3BP4-201ENST00000511509 1120 ntBASIC8.85□□□□□ -0.99
RNF40O75150 RNU6-264P-201ENST00000517134 104 ntBASIC8.85□□□□□ -0.99
RNF40O75150 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC8.85□□□□□ -0.99
RNF40O75150 AC018992.1-201ENST00000523778 2149 ntBASIC8.85□□□□□ -0.99
RNF40O75150 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC8.85□□□□□ -0.99
RNF40O75150 RAN-211ENST00000541679 572 ntTSL 5 BASIC8.85□□□□□ -0.99
RNF40O75150 AC048344.2-201ENST00000547280 147 ntBASIC8.85□□□□□ -0.99
RNF40O75150 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC8.85□□□□□ -0.99
RNF40O75150 APEX1-214ENST00000557054 888 ntTSL 5 BASIC8.85□□□□□ -0.99
RNF40O75150 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.85□□□□□ -0.99
RNF40O75150 AC090607.2-201ENST00000560331 695 ntBASIC8.85□□□□□ -0.99
RNF40O75150 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.85□□□□□ -0.99
RNF40O75150 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC8.85□□□□□ -0.99
RNF40O75150 AC015917.1-201ENST00000579654 510 ntBASIC8.85□□□□□ -0.99
RNF40O75150 WDR45BP1-201ENST00000583470 1029 ntBASIC8.85□□□□□ -0.99
RNF40O75150 AL078623.1-201ENST00000602702 907 ntBASIC8.85□□□□□ -0.99
RNF40O75150 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC8.85□□□□□ -0.99
RNF40O75150 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC8.85□□□□□ -0.99
RNF40O75150 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC8.85□□□□□ -0.99
RNF40O75150 AL132765.2-201ENST00000610812 351 ntBASIC8.85□□□□□ -0.99
RNF40O75150 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC8.85□□□□□ -0.99
RNF40O75150 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC8.85□□□□□ -0.99
RNF40O75150 AC073488.11-201ENST00000633298 754 ntBASIC8.85□□□□□ -0.99
RNF40O75150 SMARCA2-202ENST00000324954 1781 ntTSL 5 BASIC8.85□□□□□ -0.99
RNF40O75150 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.85□□□□□ -0.99
RNF40O75150 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
RNF40O75150 EEF1A1P2-201ENST00000553854 1447 ntBASIC8.85□□□□□ -0.99
RNF40O75150 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.85□□□□□ -0.99
RNF40O75150 XIST-211ENST00000635841 1734 ntTSL 5 BASIC8.85□□□□□ -0.99
RNF40O75150 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC8.85□□□□□ -0.99
RNF40O75150 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 MTND5P1-201ENST00000445440 1375 ntBASIC8.85□□□□□ -0.99
RNF40O75150 LINC00608-202ENST00000432733 2818 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 AL590763.1-201ENST00000398297 1545 ntBASIC8.85□□□□□ -0.99
RNF40O75150 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 AC013268.3-201ENST00000262716 2324 ntBASIC8.85□□□□□ -0.99
RNF40O75150 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC8.84□□□□□ -0.99
RNF40O75150 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.84□□□□□ -0.99
RNF40O75150 SLC9B1P3-201ENST00000452667 1334 ntBASIC8.84□□□□□ -0.99
RNF40O75150 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
RNF40O75150 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC8.84□□□□□ -0.99
RNF40O75150 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 RNU6-254P-201ENST00000363377 107 ntBASIC8.84□□□□□ -0.99
RNF40O75150 Y_RNA.132-201ENST00000363421 102 ntBASIC8.84□□□□□ -0.99
RNF40O75150 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC8.84□□□□□ -0.99
RNF40O75150 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 RNU1-8P-201ENST00000384328 165 ntBASIC8.84□□□□□ -0.99
RNF40O75150 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 RFKP1-201ENST00000400940 428 ntBASIC8.84□□□□□ -0.99
RNF40O75150 TDGF1P4-201ENST00000401555 520 ntBASIC8.84□□□□□ -0.99
RNF40O75150 RN7SKP110-201ENST00000410146 285 ntBASIC8.84□□□□□ -0.99
RNF40O75150 RPL21P107-201ENST00000411449 460 ntBASIC8.84□□□□□ -0.99
RNF40O75150 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC8.84□□□□□ -0.99
RNF40O75150 FMO7P-201ENST00000436045 768 ntBASIC8.84□□□□□ -0.99
RNF40O75150 HMGB3P9-201ENST00000441799 583 ntBASIC8.84□□□□□ -0.99
RNF40O75150 AL451081.2-201ENST00000448115 933 ntBASIC8.84□□□□□ -0.99
RNF40O75150 BX842559.2-201ENST00000451418 605 ntBASIC8.84□□□□□ -0.99
RNF40O75150 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RNF40O75150 RPL7AP52-201ENST00000458096 790 ntBASIC8.84□□□□□ -0.99
RNF40O75150 RN7SL395P-201ENST00000462960 291 ntBASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms