Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.38□□□□□ -1.39
SMAD6O43541 RPL5P7-201ENST00000444235 813 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 RN7SL254P-201ENST00000460609 284 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 RPL34P33-201ENST00000486062 334 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 AP002453.1-201ENST00000492327 668 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 OR7E99P-201ENST00000505750 922 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.38□□□□□ -1.39
SMAD6O43541 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.38□□□□□ -1.39
SMAD6O43541 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.38□□□□□ -1.39
SMAD6O43541 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.38□□□□□ -1.39
SMAD6O43541 AC009120.3-201ENST00000563335 499 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 MRPS21P8-201ENST00000569196 235 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 MIR4701-201ENST00000583094 63 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 AC010998.3-201ENST00000613871 631 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 AL162574.2-201ENST00000614618 657 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 MIR7159-201ENST00000620587 66 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.38□□□□□ -1.39
SMAD6O43541 EIF3EP1-201ENST00000433978 1316 ntBASIC6.38□□□□□ -1.39
SMAD6O43541 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SMAD6O43541 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.38□□□□□ -1.39
SMAD6O43541 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
SMAD6O43541 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
SMAD6O43541 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.38□□□□□ -1.39
SMAD6O43541 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
SMAD6O43541 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.38□□□□□ -1.39
SMAD6O43541 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.38□□□□□ -1.39
SMAD6O43541 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SMAD6O43541 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
SMAD6O43541 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMAD6O43541 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SMAD6O43541 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.37□□□□□ -1.39
SMAD6O43541 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SMAD6O43541 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.37□□□□□ -1.39
SMAD6O43541 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SMAD6O43541 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.37□□□□□ -1.39
SMAD6O43541 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SMAD6O43541 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SMAD6O43541 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SMAD6O43541 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
SMAD6O43541 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
SMAD6O43541 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.37□□□□□ -1.39
SMAD6O43541 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.37□□□□□ -1.39
SMAD6O43541 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SMAD6O43541 IFIT1P1-201ENST00000400497 1449 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 RNA5SP478-201ENST00000364657 115 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 MIR621-201ENST00000384919 96 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 RAB5CP1-201ENST00000395972 580 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 RNA5SP115-201ENST00000411160 107 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.37□□□□□ -1.39
SMAD6O43541 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.37□□□□□ -1.39
SMAD6O43541 AC013410.2-201ENST00000422627 201 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.37□□□□□ -1.39
SMAD6O43541 RPL7AP14-201ENST00000424041 802 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.37□□□□□ -1.39
SMAD6O43541 AL138899.2-201ENST00000439139 499 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.37□□□□□ -1.39
SMAD6O43541 HIGD1AP16-201ENST00000450986 258 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 VPS25P1-201ENST00000455691 508 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 SNX18P26-201ENST00000458433 740 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 AC117394.1-201ENST00000477323 567 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.37□□□□□ -1.39
SMAD6O43541 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.37□□□□□ -1.39
SMAD6O43541 AC005363.1-201ENST00000530779 351 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.37□□□□□ -1.39
SMAD6O43541 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SMAD6O43541 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.37□□□□□ -1.39
SMAD6O43541 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.37□□□□□ -1.39
SMAD6O43541 AL591167.1-201ENST00000607321 456 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 AL445649.1-201ENST00000615941 691 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.37□□□□□ -1.39
SMAD6O43541 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.37□□□□□ -1.39
SMAD6O43541 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.37□□□□□ -1.39
SMAD6O43541 AL731556.1-201ENST00000394628 3711 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 ZNF658B-201ENST00000602828 3408 ntBASIC6.37□□□□□ -1.39
SMAD6O43541 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
SMAD6O43541 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.37□□□□□ -1.39
SMAD6O43541 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SMAD6O43541 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SMAD6O43541 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SMAD6O43541 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SMAD6O43541 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SMAD6O43541 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SMAD6O43541 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
SMAD6O43541 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.37□□□□□ -1.39
SMAD6O43541 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMAD6O43541 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SMAD6O43541 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMAD6O43541 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms