Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PRELID1P1-201ENST00000403549 660 ntBASIC7.67□□□□□ -1.18
SOX1O00570 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 AL133325.1-201ENST00000421090 382 ntBASIC7.67□□□□□ -1.18
SOX1O00570 DPPA2P1-201ENST00000428060 556 ntBASIC7.67□□□□□ -1.18
SOX1O00570 NANOGP2-201ENST00000435391 727 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC129850.1-201ENST00000436203 508 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC7.67□□□□□ -1.18
SOX1O00570 HMGB3P6-201ENST00000444896 598 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC073109.1-201ENST00000445066 978 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC097262.1-201ENST00000452559 548 ntBASIC7.67□□□□□ -1.18
SOX1O00570 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.67□□□□□ -1.18
SOX1O00570 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.67□□□□□ -1.18
SOX1O00570 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.67□□□□□ -1.18
SOX1O00570 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC7.67□□□□□ -1.18
SOX1O00570 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC7.67□□□□□ -1.18
SOX1O00570 BZW1P2-201ENST00000473537 826 ntBASIC7.67□□□□□ -1.18
SOX1O00570 NAA50-206ENST00000493454 964 ntTSL 2 BASIC7.67□□□□□ -1.18
SOX1O00570 AC093890.1-201ENST00000502554 540 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7.67□□□□□ -1.18
SOX1O00570 AC008638.1-201ENST00000506035 866 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC133963.2-201ENST00000513686 578 ntBASIC7.67□□□□□ -1.18
SOX1O00570 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 RNU6-720P-201ENST00000516363 108 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SOX1O00570 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC7.67□□□□□ -1.18
SOX1O00570 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC7.67□□□□□ -1.18
SOX1O00570 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC7.67□□□□□ -1.18
SOX1O00570 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.67□□□□□ -1.18
SOX1O00570 AC090286.3-201ENST00000573133 187 ntBASIC7.67□□□□□ -1.18
SOX1O00570 MIR4719-201ENST00000585233 84 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC125494.3-201ENST00000602759 455 ntBASIC7.67□□□□□ -1.18
SOX1O00570 SMIM12P1-201ENST00000603004 274 ntBASIC7.67□□□□□ -1.18
SOX1O00570 MTND3P19-201ENST00000603825 345 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC124916.2-201ENST00000604416 224 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC004948.1-201ENST00000609858 672 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC024257.5-201ENST00000612739 531 ntBASIC7.67□□□□□ -1.18
SOX1O00570 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 AL096712.1-201ENST00000614561 159 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC073968.1-201ENST00000618594 637 ntBASIC7.67□□□□□ -1.18
SOX1O00570 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AC091932.2-201ENST00000623014 291 ntBASIC7.67□□□□□ -1.18
SOX1O00570 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.67□□□□□ -1.18
SOX1O00570 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SOX1O00570 KRT7-214ENST00000638501 398 ntTSL 5 BASIC7.67□□□□□ -1.18
SOX1O00570 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SOX1O00570 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SOX1O00570 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
SOX1O00570 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 AL356361.1-201ENST00000400943 1459 ntBASIC7.67□□□□□ -1.18
SOX1O00570 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
SOX1O00570 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
SOX1O00570 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
SOX1O00570 AC108099.1-201ENST00000564402 3258 ntBASIC7.67□□□□□ -1.18
SOX1O00570 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SOX1O00570 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SOX1O00570 MTND5P11-201ENST00000511037 1812 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SOX1O00570 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SOX1O00570 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 AC069222.1-201ENST00000608028 3360 ntBASIC7.66□□□□□ -1.18
SOX1O00570 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SOX1O00570 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SOX1O00570 RNFT1P3-201ENST00000340898 1052 ntBASIC7.66□□□□□ -1.18
SOX1O00570 RNA5SP443-201ENST00000363083 132 ntBASIC7.66□□□□□ -1.18
SOX1O00570 RNA5SP472-201ENST00000363868 119 ntBASIC7.66□□□□□ -1.18
SOX1O00570 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 OLA1P1-201ENST00000396387 1189 ntBASIC7.66□□□□□ -1.18
SOX1O00570 MOB4-205ENST00000409916 829 ntTSL 3 BASIC7.66□□□□□ -1.18
SOX1O00570 RN7SKP139-201ENST00000410411 293 ntBASIC7.66□□□□□ -1.18
SOX1O00570 RN7SKP144-201ENST00000411108 279 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AL390774.1-201ENST00000411924 246 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC7.66□□□□□ -1.18
SOX1O00570 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC7.66□□□□□ -1.18
SOX1O00570 VN1R20P-201ENST00000425215 966 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AC018804.1-201ENST00000430381 618 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC7.66□□□□□ -1.18
SOX1O00570 RPS14P7-201ENST00000473701 448 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AC005550.2-201ENST00000476382 318 ntBASIC7.66□□□□□ -1.18
SOX1O00570 RPL7P41-201ENST00000485823 957 ntBASIC7.66□□□□□ -1.18
SOX1O00570 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.66□□□□□ -1.18
SOX1O00570 AC093664.1-201ENST00000511779 289 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms