Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC188H7C350 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC188H7C350 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.41□□□□□ -1.38
CCDC188H7C350 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC188H7C350 AC006453.3-201ENST00000635891 377 ntBASIC6.41□□□□□ -1.38
CCDC188H7C350 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC188H7C350 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC188H7C350 AC016583.1-201ENST00000624221 2431 ntBASIC6.41□□□□□ -1.38
CCDC188H7C350 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC188H7C350 AL359955.1-201ENST00000455242 3275 ntBASIC6.41□□□□□ -1.38
CCDC188H7C350 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CCDC188H7C350 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC188H7C350 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC188H7C350 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC188H7C350 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC188H7C350 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC188H7C350 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC188H7C350 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 AC079248.1-201ENST00000427568 1546 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC188H7C350 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 ZNF402P-201ENST00000404435 3100 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 AC015799.1-201ENST00000622996 3122 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC188H7C350 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC188H7C350 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC188H7C350 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 OR7A2P-201ENST00000304105 930 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC188H7C350 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCDC188H7C350 RN7SKP221-201ENST00000410420 301 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 CDC42P6-201ENST00000421246 576 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 NPM1P48-201ENST00000436002 853 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 AC013403.1-201ENST00000436954 263 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 RN7SL70P-201ENST00000478322 302 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC188H7C350 RPL23AP40-201ENST00000487630 390 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC188H7C350 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC188H7C350 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.4□□□□□ -1.38
CCDC188H7C350 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC188H7C350 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC188H7C350 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC188H7C350 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC188H7C350 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC188H7C350 AC010287.1-201ENST00000566916 357 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 PPIAP14-201ENST00000577627 496 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 CCDC58P1-201ENST00000578567 430 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 RN7SL131P-201ENST00000579043 256 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 AC010998.3-201ENST00000613871 631 ntBASIC6.4□□□□□ -1.38
CCDC188H7C350 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC188H7C350 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC188H7C350 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC188H7C350 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC188H7C350 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC188H7C350 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC188H7C350 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CCDC188H7C350 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.4□□□□□ -1.39
CCDC188H7C350 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CCDC188H7C350 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CCDC188H7C350 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC188H7C350 AL449283.1-201ENST00000602631 3403 ntBASIC6.4□□□□□ -1.39
CCDC188H7C350 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.4□□□□□ -1.39
CCDC188H7C350 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC188H7C350 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
CCDC188H7C350 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC188H7C350 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC188H7C350 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
CCDC188H7C350 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CCDC188H7C350 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC188H7C350 RN7SKP128-201ENST00000364270 303 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 AC026310.1-201ENST00000396004 378 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC188H7C350 RN7SKP166-201ENST00000410812 305 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 AL354868.1-201ENST00000417077 482 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC188H7C350 PTPN2P1-201ENST00000423212 1072 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC188H7C350 AL354893.1-201ENST00000433735 348 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC188H7C350 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC188H7C350 AC019185.3-201ENST00000438805 323 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 AC239800.1-201ENST00000442049 719 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 RPS7P4-201ENST00000444127 582 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC188H7C350 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC188H7C350 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC188H7C350 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
CCDC188H7C350 AC124945.1-201ENST00000485133 188 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms