Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC020916.2-201ENST00000591242 360 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AL589743.6-201ENST00000611025 117 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
TCRBV7S3A2A0A539 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
TCRBV7S3A2A0A539 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.4
TCRBV7S3A2A0A539 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AP000547.3-204ENST00000588548 2523 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 CCNT2P1-201ENST00000423082 1315 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 RNU6-819P-201ENST00000364116 107 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 SNORA43.1-201ENST00000364863 140 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AL121835.1-201ENST00000404250 354 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 MIR1266-201ENST00000408125 84 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 Z85994.2-201ENST00000434327 452 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 RPL31P11-202ENST00000454082 372 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 RN7SL643P-201ENST00000471845 291 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 SNORA70.17-201ENST00000516449 133 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AC008055.1-201ENST00000547032 609 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AC027796.1-201ENST00000575593 512 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AC020915.5-201ENST00000596836 964 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AC022106.1-201ENST00000612834 766 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 MIR6070-201ENST00000613967 103 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AC091059.2-201ENST00000623355 614 ntBASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
TCRBV7S3A2A0A539 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 RNU1-59P-201ENST00000364829 162 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AL157702.1-201ENST00000398764 426 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 RN7SKP121-201ENST00000410842 305 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 RPS26P38-201ENST00000414476 348 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 RPL21P50-201ENST00000417698 477 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 GAPDHP23-201ENST00000444823 993 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 NPM1P9-201ENST00000453156 844 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 RPL12P31-201ENST00000478433 450 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 RNA5SP116-201ENST00000516132 98 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 OR8K2P-201ENST00000524645 927 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms