Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 AL121579.2-201ENST00000555466 590 ntBASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 AC104687.2-201ENST00000604442 342 ntBASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 AC087269.2-201ENST00000641764 975 ntBASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 SEMA4D-202ENST00000356444 4503 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
RIMBP3Q9UFD9 AC024587.1-201ENST00000505925 2157 ntBASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 SNORA70.2-201ENST00000364506 135 ntBASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 RNA5SP339-201ENST00000390987 122 ntBASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 AC073072.2-201ENST00000447425 348 ntBASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 AC090638.1-201ENST00000498296 909 ntBASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC9.47□□□□□ -0.89
RIMBP3Q9UFD9 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 OR2W4P-201ENST00000406496 926 ntBASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 U3.36-201ENST00000408418 213 ntBASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 AC004129.2-201ENST00000457229 287 ntBASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 AC141002.1-201ENST00000607025 279 ntBASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
RIMBP3Q9UFD9 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC9.46□□□□□ -0.9
RIMBP3Q9UFD9 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
RIMBP3Q9UFD9 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC9.46□□□□□ -0.9
RIMBP3Q9UFD9 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
RIMBP3Q9UFD9 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC9.46□□□□□ -0.9
RIMBP3Q9UFD9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
RIMBP3Q9UFD9 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
RIMBP3Q9UFD9 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC9.46□□□□□ -0.9
RIMBP3Q9UFD9 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
RIMBP3Q9UFD9 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 AL157777.1-201ENST00000468100 304 ntBASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 AC091965.3-201ENST00000506236 208 ntBASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 UBE2Q2P10-201ENST00000514854 900 ntBASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 SNORA70.11-201ENST00000515987 138 ntBASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 SNORA70.13-201ENST00000516116 138 ntBASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 CCDC58P3-201ENST00000590792 430 ntBASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 AL513548.2-201ENST00000602994 1207 ntBASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 SAMMSON-209ENST00000641222 1100 ntBASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 IQCB2P-201ENST00000401788 1633 ntBASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 BX119917.1-201ENST00000432517 502 ntBASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 OR4A13P-201ENST00000529316 942 ntBASIC9.45□□□□□ -0.9
RIMBP3Q9UFD9 RPA2P3-201ENST00000533268 770 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms