Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 RPL12P13-201ENST00000310055 497 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 RN7SKP78-201ENST00000364711 318 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AL512504.1-201ENST00000415494 778 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 ZFAND6P1-201ENST00000434138 605 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AL392003.1-201ENST00000434394 243 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 PNKDP1-201ENST00000435914 430 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 MTND4P15-201ENST00000437913 1033 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 IGLVIV-64-201ENST00000518581 301 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AC125612.1-201ENST00000547580 377 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 MRPS21P8-201ENST00000569196 235 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AC010547.7-201ENST00000570323 333 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AC073046.2-201ENST00000604756 527 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AP001437.1-201ENST00000608783 456 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 AL590410.1-201ENST00000617925 333 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AL929601.4-201ENST00000613011 1341 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AC093225.1-201ENST00000506867 1408 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 RAD17P2-201ENST00000451754 1977 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 OR6K3-202ENST00000368146 996 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 LCN1P2-201ENST00000372030 223 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 MIR1204-201ENST00000408388 67 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 Z68868.1-201ENST00000429048 544 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AC094019.1-201ENST00000434678 472 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 RPS15AP29-201ENST00000445539 400 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AC022206.1-201ENST00000495947 347 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 RBBP4P1-201ENST00000502424 1276 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 RN7SKP35-201ENST00000517210 151 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AC012414.2-201ENST00000559474 187 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AC090079.2-201ENST00000575289 768 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AL096712.1-201ENST00000614561 159 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AL162233.1-201ENST00000620014 944 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 AC026124.2-201ENST00000621847 656 ntBASIC6.5□□□□□ -1.37
HMGB4Q8WW32 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms