Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.65□□□□□ -1.5
FNDC9Q8TBE3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC9Q8TBE3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC9Q8TBE3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC9Q8TBE3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.65□□□□□ -1.5
FNDC9Q8TBE3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.65□□□□□ -1.5
FNDC9Q8TBE3 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.65□□□□□ -1.5
FNDC9Q8TBE3 AC018659.2-201ENST00000624690 715 ntBASIC5.65□□□□□ -1.5
FNDC9Q8TBE3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FNDC9Q8TBE3 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.65□□□□□ -1.51
FNDC9Q8TBE3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.65□□□□□ -1.51
FNDC9Q8TBE3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.51
FNDC9Q8TBE3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FNDC9Q8TBE3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FNDC9Q8TBE3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FNDC9Q8TBE3 CCAT2-201ENST00000630920 1752 ntBASIC5.65□□□□□ -1.51
FNDC9Q8TBE3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
FNDC9Q8TBE3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FNDC9Q8TBE3 AP004289.1-201ENST00000436307 2205 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 FUNDC2P3-201ENST00000334716 533 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 RNA5SP346-201ENST00000363541 121 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 RAB5CP1-201ENST00000395972 580 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 GCNT1P4-201ENST00000404096 329 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 RNA5SP431-201ENST00000410312 120 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 HMGB1P7-201ENST00000450921 612 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 RPL5P12-201ENST00000477071 851 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AC117394.1-201ENST00000477323 567 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 RPL12P30-201ENST00000488389 499 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 KHDC1P1-201ENST00000511053 508 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 MAST4-IT1-201ENST00000514241 658 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AL845552.1-201ENST00000556820 323 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AC026826.3-201ENST00000561747 158 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AC097641.3-201ENST00000613523 464 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AP003789.1-201ENST00000617737 605 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 MIR7159-201ENST00000620587 66 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AP001052.1-201ENST00000626421 99 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AC073488.6-201ENST00000632293 754 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AC105235.1-201ENST00000623208 1816 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FNDC9Q8TBE3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 AL355355.1-201ENST00000442900 793 ntBASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 RN7SL326P-201ENST00000477493 296 ntBASIC5.63□□□□□ -1.51
FNDC9Q8TBE3 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms