Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RPS7P3-201ENST00000443360 580 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 CYP4F27P-201ENST00000514557 494 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AC005244.1-201ENST00000582566 339 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AL021918.2-201ENST00000613415 194 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AP005431.1-201ENST00000618479 319 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 SNX18P12-201ENST00000624821 759 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 RN7SKP77-201ENST00000363261 353 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 VN1R3-201ENST00000418822 919 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AC245884.2-201ENST00000426257 404 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 VN1R110P-201ENST00000438988 971 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AL157777.1-201ENST00000468100 304 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AC008429.4-201ENST00000521201 182 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AC007494.1-201ENST00000562293 760 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 uc_338.26-201ENST00000612659 160 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AC027088.4-201ENST00000611559 1947 ntBASIC9.47□□□□□ -0.89
VPS8Q8N3P4 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 RPS3P2-201ENST00000421346 701 ntBASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AC093166.4-201ENST00000457867 318 ntBASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AC090568.1-201ENST00000509499 856 ntBASIC9.47□□□□□ -0.89
VPS8Q8N3P4 SETP21-201ENST00000514799 892 ntBASIC9.47□□□□□ -0.89
VPS8Q8N3P4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AL355974.3-201ENST00000617383 467 ntBASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AC129778.1-202ENST00000623812 261 ntBASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AL591379.1-207ENST00000635982 261 ntBASIC9.47□□□□□ -0.89
VPS8Q8N3P4 AMYH02020865.1-205ENST00000636189 261 ntBASIC9.47□□□□□ -0.89
VPS8Q8N3P4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS8Q8N3P4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
VPS8Q8N3P4 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
VPS8Q8N3P4 RBPJP7-201ENST00000442803 1447 ntBASIC9.46□□□□□ -0.89
VPS8Q8N3P4 RBPJP5-201ENST00000449433 1447 ntBASIC9.46□□□□□ -0.89
VPS8Q8N3P4 AL121768.1-201ENST00000613917 2544 ntBASIC9.46□□□□□ -0.89
VPS8Q8N3P4 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
VPS8Q8N3P4 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 TTC3P1-201ENST00000399586 6081 ntBASIC9.46□□□□□ -0.9
VPS8Q8N3P4 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 RPL7L1P3-201ENST00000455249 689 ntBASIC9.46□□□□□ -0.9
VPS8Q8N3P4 AP000648.1-201ENST00000529682 397 ntBASIC9.46□□□□□ -0.9
VPS8Q8N3P4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 MIR4776-2-201ENST00000580204 80 ntBASIC9.46□□□□□ -0.9
VPS8Q8N3P4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 AC100767.2-201ENST00000604840 693 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms