Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
MRPL54Q6P161 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MRPL54Q6P161 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 AC005224.3-201ENST00000584683 2140 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 AL359091.1-201ENST00000449048 1734 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MRPL54Q6P161 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MRPL54Q6P161 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 TCP1P3-201ENST00000414406 1498 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MRPL54Q6P161 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MRPL54Q6P161 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MRPL54Q6P161 RNA5SP321-201ENST00000362722 111 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 RNA5SP176-201ENST00000390956 110 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 AL157884.1-201ENST00000424561 454 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 HSPE1P16-201ENST00000426640 348 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 AP006193.1-201ENST00000440724 485 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 AC016908.1-201ENST00000442571 1219 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 GAPDHP33-201ENST00000443168 1013 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 MED28P3-201ENST00000444288 531 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 RN7SL492P-201ENST00000460700 295 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 RPS2P25-201ENST00000467247 580 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MRPL54Q6P161 AL135933.1-201ENST00000498657 802 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 RNA5SP230-201ENST00000517039 122 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 CASC11-203ENST00000519071 791 ntTSL 3 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 TPM3P3-201ENST00000521343 354 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 AP003499.1-201ENST00000527217 574 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 OR8A2P-201ENST00000528631 952 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 AC025252.2-201ENST00000537470 502 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 AL132640.1-201ENST00000559594 619 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 AC063977.7-201ENST00000594454 337 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 FAM72A-208ENST00000607379 1139 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 MIR7159-201ENST00000620587 66 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 AL035425.4-201ENST00000624509 1063 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 TEX41-255ENST00000626404 610 ntTSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MRPL54Q6P161 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MRPL54Q6P161 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 AP001029.2-203ENST00000589795 4910 ntBASIC4.58□□□□□ -1.68
MRPL54Q6P161 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.58□□□□□ -1.68
MRPL54Q6P161 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MRPL54Q6P161 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MRPL54Q6P161 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
MRPL54Q6P161 MTCO1P7-201ENST00000419523 1542 ntBASIC4.57□□□□□ -1.68
MRPL54Q6P161 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 AC020633.1-201ENST00000468439 2247 ntBASIC4.57□□□□□ -1.68
MRPL54Q6P161 AC120036.2-201ENST00000509729 1474 ntBASIC4.57□□□□□ -1.68
MRPL54Q6P161 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MRPL54Q6P161 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
MRPL54Q6P161 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.57□□□□□ -1.68
MRPL54Q6P161 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
MRPL54Q6P161 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MRPL54Q6P161 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MRPL54Q6P161 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MRPL54Q6P161 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MRPL54Q6P161 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 RN7SKP189-201ENST00000365042 330 ntBASIC4.57□□□□□ -1.68
MRPL54Q6P161 U3.14-201ENST00000365363 227 ntBASIC4.57□□□□□ -1.68
MRPL54Q6P161 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 VIM2P-201ENST00000402383 1294 ntBASIC4.57□□□□□ -1.68
MRPL54Q6P161 SNORA77.2-201ENST00000408571 112 ntBASIC4.57□□□□□ -1.68
MRPL54Q6P161 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 SETP15-201ENST00000412724 337 ntBASIC4.57□□□□□ -1.68
MRPL54Q6P161 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MRPL54Q6P161 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC4.57□□□□□ -1.68
MRPL54Q6P161 AP003385.1-201ENST00000426387 893 ntBASIC4.57□□□□□ -1.68
MRPL54Q6P161 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms