Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.56□□□□□ -1.52
SRP9P49458 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SRP9P49458 AC007562.1-201ENST00000421819 517 ntBASIC5.56□□□□□ -1.52
SRP9P49458 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.56□□□□□ -1.52
SRP9P49458 GPN3P1-201ENST00000423883 535 ntBASIC5.56□□□□□ -1.52
SRP9P49458 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SRP9P49458 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.56□□□□□ -1.52
SRP9P49458 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.56□□□□□ -1.52
SRP9P49458 COL11A2P1-205ENST00000441798 676 ntBASIC5.56□□□□□ -1.52
SRP9P49458 GAPDHP37-201ENST00000442317 968 ntBASIC5.56□□□□□ -1.52
SRP9P49458 AC023274.2-201ENST00000445264 521 ntBASIC5.56□□□□□ -1.52
SRP9P49458 AL022237.1-201ENST00000446663 358 ntBASIC5.56□□□□□ -1.52
SRP9P49458 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.56□□□□□ -1.52
SRP9P49458 VN1R38P-201ENST00000450265 887 ntBASIC5.56□□□□□ -1.52
SRP9P49458 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.56□□□□□ -1.52
SRP9P49458 SNX18P26-201ENST00000458433 740 ntBASIC5.56□□□□□ -1.52
SRP9P49458 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.56□□□□□ -1.52
SRP9P49458 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.56□□□□□ -1.52
SRP9P49458 AC091965.3-201ENST00000506236 208 ntBASIC5.56□□□□□ -1.52
SRP9P49458 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.56□□□□□ -1.52
SRP9P49458 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.56□□□□□ -1.52
SRP9P49458 RN7SKP64-201ENST00000517206 328 ntBASIC5.56□□□□□ -1.52
SRP9P49458 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.56□□□□□ -1.52
SRP9P49458 GTF2IP11-201ENST00000526931 420 ntBASIC5.56□□□□□ -1.52
SRP9P49458 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SRP9P49458 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.56□□□□□ -1.52
SRP9P49458 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.56□□□□□ -1.52
SRP9P49458 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.56□□□□□ -1.52
SRP9P49458 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.56□□□□□ -1.52
SRP9P49458 AL049840.6-201ENST00000604583 345 ntBASIC5.56□□□□□ -1.52
SRP9P49458 MIR6085-201ENST00000618314 110 ntBASIC5.56□□□□□ -1.52
SRP9P49458 AC241377.1-201ENST00000619797 406 ntBASIC5.56□□□□□ -1.52
SRP9P49458 AP001264.1-201ENST00000620602 703 ntBASIC5.56□□□□□ -1.52
SRP9P49458 AL353684.1-201ENST00000622677 1120 ntBASIC5.56□□□□□ -1.52
SRP9P49458 AL132640.3-201ENST00000630473 177 ntBASIC5.56□□□□□ -1.52
SRP9P49458 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.56□□□□□ -1.52
SRP9P49458 USP9YP3-201ENST00000434481 1766 ntBASIC5.56□□□□□ -1.52
SRP9P49458 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SRP9P49458 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SRP9P49458 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SRP9P49458 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SRP9P49458 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.56□□□□□ -1.52
SRP9P49458 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SRP9P49458 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SRP9P49458 AL355834.1-201ENST00000556602 3965 ntBASIC5.56□□□□□ -1.52
SRP9P49458 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SRP9P49458 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.56□□□□□ -1.52
SRP9P49458 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.55□□□□□ -1.52
SRP9P49458 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 WDR95P-201ENST00000425638 1542 ntBASIC5.55□□□□□ -1.52
SRP9P49458 AC079248.1-201ENST00000427568 1546 ntBASIC5.55□□□□□ -1.52
SRP9P49458 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SRP9P49458 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
SRP9P49458 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 AL121835.1-201ENST00000404250 354 ntBASIC5.55□□□□□ -1.52
SRP9P49458 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.55□□□□□ -1.52
SRP9P49458 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.55□□□□□ -1.52
SRP9P49458 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.55□□□□□ -1.52
SRP9P49458 CYCSP52-201ENST00000422857 310 ntBASIC5.55□□□□□ -1.52
SRP9P49458 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.55□□□□□ -1.52
SRP9P49458 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.55□□□□□ -1.52
SRP9P49458 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SRP9P49458 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.55□□□□□ -1.52
SRP9P49458 AL445687.2-201ENST00000458156 728 ntBASIC5.55□□□□□ -1.52
SRP9P49458 RN7SL221P-201ENST00000466190 281 ntBASIC5.55□□□□□ -1.52
SRP9P49458 AC114728.1-201ENST00000488289 483 ntBASIC5.55□□□□□ -1.52
SRP9P49458 AC015524.1-201ENST00000491585 472 ntBASIC5.55□□□□□ -1.52
SRP9P49458 SNRPCP11-201ENST00000492453 205 ntBASIC5.55□□□□□ -1.52
SRP9P49458 AC090058.1-201ENST00000498788 435 ntBASIC5.55□□□□□ -1.52
SRP9P49458 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.55□□□□□ -1.52
SRP9P49458 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SRP9P49458 AC037479.1-201ENST00000558361 625 ntBASIC5.55□□□□□ -1.52
SRP9P49458 AC023968.1-201ENST00000560719 475 ntBASIC5.55□□□□□ -1.52
SRP9P49458 PPIAP14-201ENST00000577627 496 ntBASIC5.55□□□□□ -1.52
SRP9P49458 MIR212-201ENST00000586026 110 ntBASIC5.55□□□□□ -1.52
SRP9P49458 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.55□□□□□ -1.52
SRP9P49458 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.55□□□□□ -1.52
SRP9P49458 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 AL589743.6-201ENST00000611025 117 ntBASIC5.55□□□□□ -1.52
SRP9P49458 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SRP9P49458 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
SRP9P49458 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.55□□□□□ -1.52
SRP9P49458 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.55□□□□□ -1.52
SRP9P49458 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.55□□□□□ -1.52
SRP9P49458 AC022726.2-201ENST00000634673 547 ntBASIC5.55□□□□□ -1.52
SRP9P49458 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.55□□□□□ -1.52
SRP9P49458 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SRP9P49458 AL121768.1-201ENST00000613917 2544 ntBASIC5.55□□□□□ -1.52
SRP9P49458 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms